Transcript Information: R_Transcript_9090.p1


Annotated TAIR IDAT1G61210.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:22564785-22571555 | Forward length=1181
E-Value4E-202
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.602128102374
Replicate 215.189984049537
Replicate 319.544280701304
Condition 2: 8 Hour
Replicate 114.473296318752
Replicate 214.301586288989
Replicate 319.412469549457
Condition 3: 24 Hour
Replicate 120.099364650205
Replicate 219.713874919232
Replicate 322.518804953099


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_9090.p1 GENE.R_Transcript_9090~~R_Transcript_9090.p1 ORF type:complete len:763 (+),score=174.33,Katanin_con80|PF13925.2|3.4e-53,WD40|PF00400.28|0.005,WD40|PF00400.28|0.0062,WD40|PF00400.28|8.4e-06,WD40|PF00400.28|1.1e-08,WD40|PF00400.28|5.9e-07,WD40|PF00400.28|4.5,eIF2A|PF08662.7|0.048,eIF2A|PF08662.7|0.0027,eIF2A|PF08662.7|73 R_Transcript_9090:307-2595(+)
ATGGCTAAACGTGGATATAAGCTCCAGGAATTTGTGGCACATTCAGCAAATGTGAATTGTCTTAGGATTGGGAAGAAGGCATGCCGGCTTCTTCTGACGGGTGGAGATGACCACAAAGTCAACTTGTGGTCCATTGGAAAGCCGACTTCTCTAATGAGCTTGTGTGGTCATACAAGTCCAGTTGAAAGTTTGGCGTTTGACTCAACGGAGGTTTTAGTCCTTGCTGGAGCTTCTTCTGGTACAGTGAAGTTGTGGGATCTTGAAGAGGCAAAAATGGTTAGAACTCTTGCTGGTCACAGATCCAACTGCACTTCTCTCGAATTCCATCCGTTTGGGGAGTTTTTTGCTTCGGGTTCAGCAGACACTGACCTAAAGATTTGGGATATAAGAAAGAAAGGATGCATCCACACATATAAAGGCCATAATCTTGGCATCAACACCATTAAATTCACTCCTGATGGTCGATGGGTTGTTTCTGGTGGGTTTGATAATGTTGTGAAGGTATGGGATTTGACTGCCGGAAAGTTATTGCATGATTTCAAGTTCCATGATGGTCATATCAGATCCTTAGATTTCCACCCTCTTGAGTTTCTTCTAGCCACAGGTTCTGCTGACAGAACTGTTAAGTTCTGGGACTTGGAAACTTTTGAAATGATTGGATCTGCCAGAGCAGAGGCTACAGGAGTGCGTGCAATTACTTTTCATCCTGATGGGAGGACCCTTTTTTCTGGATATGACAATAGCCTGAAGGTTCATTCATGGGAGCCTGTAATTTGCCATGATGCTGTTGATATGGGATGGTCAACACTGGGTGACCTCAGCATTAGTGAAGGAAAAGTTATTGGTTGCTCTTATTACCGAAACTCCATTGGAGTTTGGGTGGCTGATCTCTCACGTATTGAGCCATACGGGAATGGTGATGCATCTCAAGACAATAACCCTATTGACGTGAAGCTTGAGACACGAGAAAGTCTTTCTGCGGAGAAAGTAGGGTCAAGCCCTAGGTCCAATATGGACTCGCGTTCGACATCCCCAGATAATGATGCTAAAGATATTAAGAATATATATGTGGATTATGAGAAACCAATCAGTTCTAAGAAAATCGGGCCACGTAGTACTTCAAGAGTGGTATCATCATTTTCTAAGGAAACCAGCAAATTGTCAGCTAAAAAGCAAAGTCCTGCTAATGCTACCCCTGGAAAATCTAATTCTCAAGCTCGTGGTAGATCTTTTGTTGTGCCAAGCTTTGTTCCAAGAGAGAGTTCTGCTAGCAAAAATTTTTCCAGTTCTAGAAGAGAGTCATTCACTCCTGCTAAATCTAGCAGTGGAGCATCTATGAAGGCTGCTCACACAAGGAGGCCATCGAATATCAAAGATGATGTAGTTATGGAAGACACAAATTCTGCCGATAGGCTTGTATCAGAACTTGGAGCTAAGGAATTGCTTGATGATAACAACTCTACTTTGAAGAGTGTTGAAGTCAAGTCTGAAATAAATTCATCTCCTACAATATCCTTTAACCTGCAAAGTGGTGACAATTCTGCTGATTGTAAAGAGACAAAAAGTGTAAAAGTGCTTAATGGAGCGGCAGTTGCTCATGGAAGGACACGTTCGCTTGTTGAAAAGTTTGAAAGAAGGGGAAAACCTACTTTCAGTGATGATCAAATGACCAGTACATCACCTGAAGTGATAGCTGATAGGATTCAGAGCTCTACCTTGCTGAAAGAAGAACCCCAAGTATCTGGAAGAGAGTCAACATCTGTGAGTGGTGCAAATATAATAGAAGATTTGATGCAAAATCATGATGTTCTACTTAGTGCCCTTCGTTCTCGCCTCACAAAGCTGCAGATGGTACGGCACTTGTGGGAACGGAATGACATCAAGGGTGCAATTAACGCACTGAGGAAGTTACCTGATCATTCGGTCCAGGCTGATGTGATTAGTGTTCTTATGGAGAAAATGGAAATGGTTACCATGGATTTGTTTTCATGTATGCTACCAGTACTAGTGGGCCTTCTGGACAGCAAGATGGAAAGGCATGCAAAAATGTCTTTGGAGATGCTACTCAAACTTGTTGCGATGTTTGGGCCAACAATCCGCTCCACAATCTCAGCACCTCCTTCTGTGGGTGTTGATCTTCACCAAGAAGAGAGGATTGAGAGCTGTAGACGGTGCTTTGGCCAGCTGCAACAGATCCAACAAGTTCTTCCTGCACTTGCAAGGAGAGGTGGTTCGCTCGCTAAATCAGCTCTTGAATTGAGTCTGGTTCTCCAAGATCATAGTGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_9090.p1 GENE.R_Transcript_9090~~R_Transcript_9090.p1 ORF type:complete len:763 (+),score=174.33,Katanin_con80|PF13925.2|3.4e-53,WD40|PF00400.28|0.005,WD40|PF00400.28|0.0062,WD40|PF00400.28|8.4e-06,WD40|PF00400.28|1.1e-08,WD40|PF00400.28|5.9e-07,WD40|PF00400.28|4.5,eIF2A|PF08662.7|0.048,eIF2A|PF08662.7|0.0027,eIF2A|PF08662.7|73 R_Transcript_9090:307-2595(+)
MAKRGYKLQEFVAHSANVNCLRIGKKACRLLLTGGDDHKVNLWSIGKPTSLMSLCGHTSPVESLAFDSTEVLVLAGASSGTVKLWDLEEAKMVRTLAGHRSNCTSLEFHPFGEFFASGSADTDLKIWDIRKKGCIHTYKGHNLGINTIKFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHDGHIRSLDFHPLEFLLATGSADRTVKFWDLETFEMIGSARAEATGVRAITFHPDGRTLFSGYDNSLKVHSWEPVICHDAVDMGWSTLGDLSISEGKVIGCSYYRNSIGVWVADLSRIEPYGNGDASQDNNPIDVKLETRESLSAEKVGSSPRSNMDSRSTSPDNDAKDIKNIYVDYEKPISSKKIGPRSTSRVVSSFSKETSKLSAKKQSPANATPGKSNSQARGRSFVVPSFVPRESSASKNFSSSRRESFTPAKSSSGASMKAAHTRRPSNIKDDVVMEDTNSADRLVSELGAKELLDDNNSTLKSVEVKSEINSSPTISFNLQSGDNSADCKETKSVKVLNGAAVAHGRTRSLVEKFERRGKPTFSDDQMTSTSPEVIADRIQSSTLLKEEPQVSGRESTSVSGANIIEDLMQNHDVLLSALRSRLTKLQMVRHLWERNDIKGAINALRKLPDHSVQADVISVLMEKMEMVTMDLFSCMLPVLVGLLDSKMERHAKMSLEMLLKLVAMFGPTIRSTISAPPSVGVDLHQEERIESCRRCFGQLQQIQQVLPALARRGGSLAKSALELSLVLQDHSV*

Click here to download the sequence:
Link to NCBI Protein BLAST