Transcript Information: R_Transcript_90900.p1


Annotated TAIR IDAT5G01450.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:183693-186244 | Reverse length=444
E-Value1E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6819277462308
Replicate 25.9023934646675
Replicate 34.6698284799023
Condition 2: 8 Hour
Replicate 13.4154103467188
Replicate 22.5431904239975
Replicate 33.2719641461642
Condition 3: 24 Hour
Replicate 14.3353799056609
Replicate 25.1588481095985
Replicate 33.5696685755455


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_90900.p1 GENE.R_Transcript_90900~~R_Transcript_90900.p1 ORF type:complete len:466 (+),score=66.89,DUF4793|PF16041.1|2.7e-27,DUF4792|PF16040.1|4e-23,zf-C3HC4_3|PF13920.2|2.5e+03,zf-C3HC4_3|PF13920.2|6.1e-15,zf-C3HC4_2|PF13923.2|1.6e+03,zf-C3HC4_2|PF13923.2|2.1e-06 R_Transcript_90900:280-1677(+)
ATGTGGGTATTTCACCAAATGGAACAACAAAACCGTACGTTACCTTTACCATCTTCAAACAATGATGTTGTTGATTCTTACTCCCCTTCTTCGGCTTCAGTGCCTTTAGTGGTAGAAACAGAGGAAAATACTCAAGATCATAACAATGGCCACCAACGGCGGCCAAGAAGTTATCCTTACAGGTTCAGTGATCAAGGGGCCTCTAGTTTTCAGTCCGGTGACTTCAGAAATGACGCTTGGTCTTGCTTAGTCGTGCTTTTGGCTTTCTGGTTCTTTGCATCTATTACCCTGATTCTTGGCTACTATGGATCTTTCACCTTACACCTGGGCCCATATTGCTCTTACTTGGTTGAAGCTAGTCCAATTTTTGTGAATGCTATTAAGGCACAGCAAGTGCAACATCAAACAGAAGGTCCCATGTTATATGGGTTTCACAACAAACCTTCACTTGAGGTTAAAACTAATTGGTCTCAAAGTCACAAAGCAATTGTAGAGCCTGGTGAATATAAGTCTTGGGCATATTACCTTAATGCTGGATCACAAATTAACATATCATATGATGTGATTTTCCCAAGTTCTACTCCCTTGTCATTCGCAATTGCCCAAGGACAAGACAACCTCCTTGATTGGATGAGTGATCCTTCATATCCTAACACTACATTGTGTTGGAAAATTATAGGAGTAGATGGAAGTGGTAATATTACACAGGACATTACAACTTCTGATTCTTACTATATAGCACTGGCTACCTTAAACAAAGAGACGGCGGTGGTTGATCTGAACATTACCATTCAATCTCGTCTGTACAATACCAGTAATGCATACTTCAAGTGTTCTTTGAATAACCATGTTTGCAGCTTCAAGCTTCTGATTCAGAGGCCAAATGCTGCCATTGTAACATCTCCTGGTCCAGGACATGTTAACTATAAAGATGATTGGCACATAAAAGTGTCTTTTGGAGCCCAGTGGGTAACATATTTGGTAGGATCAATTACAATGACCGCGATCATATTAGCAATGTTCAGTTGTTGTAACAAGTGTCAAGTAGACAATGTGGCAATGGAAAATGGAGCGGAGCAAGAGCCATTGCTTTCCCCTAAAGACGACAGTGGCTCAAGCGGGGGTTCATCTTATGACTCGGTTTCTAGTGATGAGGATCTTGAAGAGAAGCTCCTAGAGAGTGCCCTAGAAGGAAAAATCCCAAAAGAAGGGGAAGCTAATATCAATCCTCGTCTTTTGTGTGTCATATGCTTTGATGCTCCTCGCGATTGCTTTTTCCTCCCTTGTGGACATTGTGCTGCTTGTTTCACTTGTGGATCAAGGATTCTGGAGGAGGCAGGTACTTGCCCCATATGCCGTAGGAAGATCAAGAAAGTAAGGAAAATATTTCCAGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_90900.p1 GENE.R_Transcript_90900~~R_Transcript_90900.p1 ORF type:complete len:466 (+),score=66.89,DUF4793|PF16041.1|2.7e-27,DUF4792|PF16040.1|4e-23,zf-C3HC4_3|PF13920.2|2.5e+03,zf-C3HC4_3|PF13920.2|6.1e-15,zf-C3HC4_2|PF13923.2|1.6e+03,zf-C3HC4_2|PF13923.2|2.1e-06 R_Transcript_90900:280-1677(+)
MWVFHQMEQQNRTLPLPSSNNDVVDSYSPSSASVPLVVETEENTQDHNNGHQRRPRSYPYRFSDQGASSFQSGDFRNDAWSCLVVLLAFWFFASITLILGYYGSFTLHLGPYCSYLVEASPIFVNAIKAQQVQHQTEGPMLYGFHNKPSLEVKTNWSQSHKAIVEPGEYKSWAYYLNAGSQINISYDVIFPSSTPLSFAIAQGQDNLLDWMSDPSYPNTTLCWKIIGVDGSGNITQDITTSDSYYIALATLNKETAVVDLNITIQSRLYNTSNAYFKCSLNNHVCSFKLLIQRPNAAIVTSPGPGHVNYKDDWHIKVSFGAQWVTYLVGSITMTAIILAMFSCCNKCQVDNVAMENGAEQEPLLSPKDDSGSSGGSSYDSVSSDEDLEEKLLESALEGKIPKEGEANINPRLLCVICFDAPRDCFFLPCGHCAACFTCGSRILEEAGTCPICRRKIKKVRKIFPV*

Click here to download the sequence:
Link to NCBI Protein BLAST