Transcript Information: R_Transcript_90918.p1


Annotated TAIR IDAT5G54130.2
Annotated Gene NameCalcium-binding endonuclease/exonuclease/phosphatase family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21962900-21965279 | Forward length=436
E-Value2.8E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3337119028864
Replicate 20.86286166094376
Replicate 30.94137277792407
Condition 2: 8 Hour
Replicate 12.0125368449791
Replicate 21.6847239743359
Replicate 30.70451456745794
Condition 3: 24 Hour
Replicate 12.4635089947536
Replicate 21.4602796982346
Replicate 31.4991578552669


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_90918.p1 GENE.R_Transcript_90918~~R_Transcript_90918.p1 ORF type:complete len:438 (+),score=79.60,Exo_endo_phos|PF03372.19|6.8e-06 R_Transcript_90918:283-1596(+)
ATGGGTGAATCAGTGAAAGCATTGGATCAAGAGCTTTGTGATCAAGATTGGCATGAATCCCAGTATTTGGATTCCTCGGATACAATTTCTTGCACAACTTTCAATATTCTTGCTCCTATTTACAAACGTTTGGGTGGAGGGGTACGTGAGAGTGAGTTCAGGGAGTCTTGGCACAGTCGGAACAAAAGCATATTGGATAGGTTGCTTCAATTGAAATCCTCAATCATATGCTTGCAGGAATTTTGGGTGGGTAATGAAGAGCTTGTAGGGATGTATGAGAAGAGGCTTTATGATGCTGGTTACTTAACTTACAAGCTTGCACGAACAAACAACCGTGGTGATGGTCTGTTAACAGCAGTACATCAAAGCCAGTTCCGTGTGTTAAATTATAGGGAGCTTCTATTCAATGACATTGCTGATCGAGTTGCACAGATTCTGCATGTTGAGATAAGTTGTACCATTTCCCAGAGCACTTCCACCTGTGTACTGAAGGAAGCCTTAATAGTAAATACTCATTTGATATTTCCACATGATTCCAGATACTGTTTCCTCCGAATACAGCAGGCCTACAAGATTTTGCAATATCTCAGATCATACTTGAACAAATATGCTCGCTTCCTGTCATCATCTGTGGGGATTGGAATGGAAGCAAGAAGGGACATGTCTATAAGTTTTTATGTTCACAAGGCTTTGTTTCGTCCTATGACATTGCTCACCATACTGAAGATGAAACTGAAAACACACAGAAGTGGATTAGTCACCGCAACCACAGGGGAAATATCTGTGGAGTGGATTTCATATGGCTTCAAAATCCTCAGAAATTCAAGACCCTTAAAAGAGAGCTTCGTGGAAGCGATTTTGGGGAACATAAAGAACCTGCTTCACAAGGTAATCACAAAAGATGGTGATCAGATGTCAGAAACTCTTCAAACAAAGGGAAGTTGCATAAGCTACTCTGATTTTTGTCAAGCCCTTCTAGAGTTGGGCACAAGTGGACAAGGAGGATTAACTGAAGACGACATGAAGGAAATATGGGAGCATATAGATGTGGATGGAGATGGGGTCACCAATGTTGCCAACTTTTTGAGAGCATGCACCCTATGTGATTCAGTCAAATGTGAAGGTGTTGATAATGAGAGCATTGAAAAAGATTTAGATGCACAAAATTCTACAGCTACAATAGGATTTCTGGTCAAGAAGGCGACACTTTTCCCTCAAGAAGCCGAAGATGGGATGTGGCCTGAGAATTACTTGCTTTCTGATCATGCACATCTTACTGTCGAGTTTTCTATGGTGATGTTTTGTGTTGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_90918.p1 GENE.R_Transcript_90918~~R_Transcript_90918.p1 ORF type:complete len:438 (+),score=79.60,Exo_endo_phos|PF03372.19|6.8e-06 R_Transcript_90918:283-1596(+)
MGESVKALDQELCDQDWHESQYLDSSDTISCTTFNILAPIYKRLGGGVRESEFRESWHSRNKSILDRLLQLKSSIICLQEFWVGNEELVGMYEKRLYDAGYLTYKLARTNNRGDGLLTAVHQSQFRVLNYRELLFNDIADRVAQILHVEISCTISQSTSTCVLKEALIVNTHLIFPHDSRYCFLRIQQAYKILQYLRSYLNKYARFLSSSVGIGMEARRDMSISFYVHKALFRPMTLLTILKMKLKTHRSGLVTATTGEISVEWISYGFKILRNSRPLKESFVEAILGNIKNLLHKVITKDGDQMSETLQTKGSCISYSDFCQALLELGTSGQGGLTEDDMKEIWEHIDVDGDGVTNVANFLRACTLCDSVKCEGVDNESIEKDLDAQNSTATIGFLVKKATLFPQEAEDGMWPENYLLSDHAHLTVEFSMVMFCVE*

Click here to download the sequence:
Link to NCBI Protein BLAST