Transcript Information: R_Transcript_90969.p1


Annotated TAIR IDAT5G65700.1
Annotated Gene NameLeucine-rich receptor-like protein kinase family protein
Annotated Gene Symbol(s)BAM1
Annotation TypeOrtholog
Chromosome Positionchr5:26281826-26284945 | Forward length=1003
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 148.878309993063
Replicate 219.856778338277
Replicate 329.836951510924
Condition 2: 8 Hour
Replicate 137.66186155858
Replicate 234.057740356263
Replicate 351.750954528563
Condition 3: 24 Hour
Replicate 145.915614455408
Replicate 227.912891159437
Replicate 352.065440710172


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_90969.p1 GENE.R_Transcript_90969~~R_Transcript_90969.p1 ORF type:3prime_partial len:866 (+),score=151.97,LRR_8|PF13855.2|0.0015,LRR_8|PF13855.2|4.6e-06,LRR_8|PF13855.2|27,LRR_8|PF13855.2|1.8e-06,LRR_8|PF13855.2|0.00025,LRR_8|PF13855.2|0.071,LRR_8|PF13855.2|0.041,LRR_8|PF13855.2|0.053,LRR_8|PF13855.2|0.00031,Pkinase|PF00069.21|1.3e-35,Pkinase_Tyr|PF07714.13|3e-31,LRR_4|PF12799.3|0.37,LRR_4|PF12799.3|4.5,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|0.11,LRR_4|PF12799.3|53,LRR_4|PF12799.3|0.081,LRR_4|PF12799.3|0.0038,LRR_4|PF12799.3|4.4,LRR_4|PF12799.3|3.3,LRR_4|PF12799.3|5,LRR_4|PF12799.3|1.4e+02,LRR_4|PF12799.3|0.39,LRR_4|PF12799.3|0.51,LRR_4|PF12799.3|0.022,LRRNT_2|PF08263.8|5.6e-12,LRR_1|PF00560.29|54,LRR_1|PF00560.29|2.7e+03,LRR_1|PF00560.29|2.5,LRR_1|PF00560.29|34,LRR_1|PF00560.29|20,LRR_1|PF00560.29|3.4e+02,LRR_1|PF00560.29|3.6e+03,LRR_1|PF00560.29|0.37,LRR_1|PF00560.29|2.6e+02,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|2.3,LRR_1|PF00560.29|1.4e+03,LRR_1|PF00560.29|1.3e+04,LRR_1|PF00560.29|63,LRR_1|PF00560.29|3e+03,LRR_1|PF00560.29|8.5e+02,LRR_1|PF00560.29|4.1e+02,LRR_1|PF00560.29|2.6,LRR_1|PF00560.29|4.3e+02 R_Transcript_90969:187-2781(+)
ATGCAAACCCTTCTTCTCCTCTTCCTTTTCCTCCTTATCCACACACACACTTCAACTTCTAAAGTATTACCAGAATACAAAGCCTTACTCTCCATAAAATCCTCCATTTCCGACGACCCTCAGAACTCTCTATCCTCATGGGACCCCATCACCGACCACTGCACATGGTCCGGCGTCACCTGTTCTACTGGCCGCCCCCACAGAGCAGTGGTCTCACTGGATTTATCTGGGCTCAACCTCACCGGAATACTCTCACCGGACATAAGTCATCTCCCAAACCTCCAGAACCTATCACTAGCCGCCAACTCATTCTCAGGCCCTGTCCCCACCTCACTCTCTCTCCTCACTGACCTCCGTCACCTTAACCTCTCCAACAACATCTTCAACGAAACCTTCCCAACTTCCCTCTCCTCTCTCAAACTCCTCCAAGTCCTTGACCTCTACAACAACAACTTCACTGGGCCCCTCCCTTTGACTGTCTCCCTAATGCCGGAGCTCCGCCACCTCCATCTCGGGGGGAACTACTTTTCCGGTGAGATCCCTCCGGAGTATGGCCTCTGGGAAAAAATCGAGTACCTTGCTGTTTCCGACAACGAGCTTAGTGGGAAAATACCACCCGAGATCGGAAACTTGACCACCCTCAAGGAGCTTTACATTGGTTACTACAATGCTTATTCCGGTGGTCTCCCGCCTGAGATCGGGAACTTAACTCAACTTGTGAGATTCGATGGGGCTAACTGTGGTTTATCTGGTGAGATCCCACATGAGATTGGGAAGCTTCAAAATCTTGACACCCTTTTTCTTCAAGTTAATACTCTTTCTGGTAATTTACCCTCTGAACTTGGGGACTTAAAGAGCTTAAGGTCTATGGATTTGTCTAACAATATGTTGTCAGGTGAGATCCCTAAGTCTTTCTCTGAGTTGAAAAATCTGACCCTCTTGAATTTGTTTAGGAACAAGTTACATGGGGCTATACCTGAGTTCGTCGGTGAGTCGCCCCAGTTAGAGGTTCTTCAACTTTGGGAGAATAACTTCACTGGGAGTGTCCCCCAAAAGTTGGGAACTAATGGGAATTTACAGCTTCTTGATCTTTCTTCTAATAAGCTCACGGGAAACTTGCCCCCTAATTTGTGTTCTGGTAATAAGTTACAAACCCTTATCACATTGGGCAACTTTTTGTTTGGGCAAATACCTGAGTCTTTGGGGAACTGTCAGAGTTTGAGTAGAGTCAGGATGGGGGAGAATTTCCTTAATGGGTCTATTCCTAAGGGCTTGTTTGGACTTCCTAAGCTTACCCAAGTTGAGCTTCAAGATAATCTTTTGACTGGTGGGTTTCCTGATACTCATGATAAGGTTGCTGTTAATCTTGGTCAAATTAGTTTGTCTAATAATCAGCTTTCTGGGGTTTTACCCCCAAGTCTTGGTAACTTTTCTGGGGTTCAAAAGTTGCTTCTCGATGGGAATAAGTTCACTGGGAATATCCCTTCTGAGATTGGCAAGTTACAGCAACTTTCCAAGATTGATTTTAGTAGTAACAAGTTTTCTGGAGAGATCCCAACTCAGATTAGTAAGTGTAAGTTGCTTACTTTTGTTGATCTGAGCAGGAATCAGCTTTCTGGTGATATACCCACTGAAATTACTAGTATGAGGATATTGAACTACTTGAATCTTTCAAGGAATCATCTCAGTGGTAGTATTCCTGCATCTATTTCTTCTATGCAGAGCTTAACATCAGTTGATTTCTCTTACAACAATTTCTCTGGTCTAGTACCTGGGACTGGCCAGTTTAGTTACTTTAACTATACATCATTTTTGGGGAACCCTGATCTTTGTGGCCCTTATTTGGGTCCTTGCAAGAATGGGGTTGAGGGCGGTTCTCATTCTGCTCATGTTAAAGGCCTCTCTGCTTCATTGAAGCTGTTACTTGTCATTGGCCTCTTGGTGTGCTCCATTGCTTTCGCAGTGGCTGCGATCTTCAAAGCGCGGTCTTTGAAGAAGGCTAGTGAGTCGCGTGCTTGGAAGTTGACCGCTTTCCAGCGGTTAGACTTCACTGTGGATGATGTTTTGGATTGCTTGAAGGAGGATAACATTATAGGGAAAGGTGGTGCTGGGATTGTGTACAAGGGAGTGATGCCGAATGGCGATCATGTGGCCGTTAAGAGGCTACCTGCTATGAGTAGAGGGTCATCTCATGATCATGGGTTTAATGCTGAGATTCAGACTTTGGGCAAGATTAGACACAGGCATATTGTTAGATTGTTGGGATTCTGCTCTAATCATGAGACAAATCTCTTGGTCTATGAGTACATGCCTAATGGAAGCTTGGGAGAAATGCTTCATGGCAAGAAAGGGGGTCATTTGCATTGGGATACAAGGTATAAGATTGCCATTGAGGCAGCAAAGGGCCTTTGCTATCTTCACCATGACTGCTCTCCGTTGATCGTTCACCGTGATGTCAAGTCCAACAATATCCTTTTGGATTCCGGCTTTGAAGCTCATGTTGCTGATTTTGGGCTTGCTAAGTTCTTGCAAGATTCAGGCACTTCAGAGTGCATGTCTGCCATTGCTGGTTCTTATGGATACATTGCTCCTGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_90969.p1 GENE.R_Transcript_90969~~R_Transcript_90969.p1 ORF type:3prime_partial len:866 (+),score=151.97,LRR_8|PF13855.2|0.0015,LRR_8|PF13855.2|4.6e-06,LRR_8|PF13855.2|27,LRR_8|PF13855.2|1.8e-06,LRR_8|PF13855.2|0.00025,LRR_8|PF13855.2|0.071,LRR_8|PF13855.2|0.041,LRR_8|PF13855.2|0.053,LRR_8|PF13855.2|0.00031,Pkinase|PF00069.21|1.3e-35,Pkinase_Tyr|PF07714.13|3e-31,LRR_4|PF12799.3|0.37,LRR_4|PF12799.3|4.5,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|0.11,LRR_4|PF12799.3|53,LRR_4|PF12799.3|0.081,LRR_4|PF12799.3|0.0038,LRR_4|PF12799.3|4.4,LRR_4|PF12799.3|3.3,LRR_4|PF12799.3|5,LRR_4|PF12799.3|1.4e+02,LRR_4|PF12799.3|0.39,LRR_4|PF12799.3|0.51,LRR_4|PF12799.3|0.022,LRRNT_2|PF08263.8|5.6e-12,LRR_1|PF00560.29|54,LRR_1|PF00560.29|2.7e+03,LRR_1|PF00560.29|2.5,LRR_1|PF00560.29|34,LRR_1|PF00560.29|20,LRR_1|PF00560.29|3.4e+02,LRR_1|PF00560.29|3.6e+03,LRR_1|PF00560.29|0.37,LRR_1|PF00560.29|2.6e+02,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|2.3,LRR_1|PF00560.29|1.4e+03,LRR_1|PF00560.29|1.3e+04,LRR_1|PF00560.29|63,LRR_1|PF00560.29|3e+03,LRR_1|PF00560.29|8.5e+02,LRR_1|PF00560.29|4.1e+02,LRR_1|PF00560.29|2.6,LRR_1|PF00560.29|4.3e+02 R_Transcript_90969:187-2781(+)
MQTLLLLFLFLLIHTHTSTSKVLPEYKALLSIKSSISDDPQNSLSSWDPITDHCTWSGVTCSTGRPHRAVVSLDLSGLNLTGILSPDISHLPNLQNLSLAANSFSGPVPTSLSLLTDLRHLNLSNNIFNETFPTSLSSLKLLQVLDLYNNNFTGPLPLTVSLMPELRHLHLGGNYFSGEIPPEYGLWEKIEYLAVSDNELSGKIPPEIGNLTTLKELYIGYYNAYSGGLPPEIGNLTQLVRFDGANCGLSGEIPHEIGKLQNLDTLFLQVNTLSGNLPSELGDLKSLRSMDLSNNMLSGEIPKSFSELKNLTLLNLFRNKLHGAIPEFVGESPQLEVLQLWENNFTGSVPQKLGTNGNLQLLDLSSNKLTGNLPPNLCSGNKLQTLITLGNFLFGQIPESLGNCQSLSRVRMGENFLNGSIPKGLFGLPKLTQVELQDNLLTGGFPDTHDKVAVNLGQISLSNNQLSGVLPPSLGNFSGVQKLLLDGNKFTGNIPSEIGKLQQLSKIDFSSNKFSGEIPTQISKCKLLTFVDLSRNQLSGDIPTEITSMRILNYLNLSRNHLSGSIPASISSMQSLTSVDFSYNNFSGLVPGTGQFSYFNYTSFLGNPDLCGPYLGPCKNGVEGGSHSAHVKGLSASLKLLLVIGLLVCSIAFAVAAIFKARSLKKASESRAWKLTAFQRLDFTVDDVLDCLKEDNIIGKGGAGIVYKGVMPNGDHVAVKRLPAMSRGSSHDHGFNAEIQTLGKIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEMLHGKKGGHLHWDTRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSGFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPE

Click here to download the sequence:
Link to NCBI Protein BLAST