Transcript Information: R_Transcript_91296.p1


Annotated TAIR IDAT5G49960.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1012 (InterPro:IPR010420); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1012) (TAIR:AT5G02940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20324173-20327687 | Reverse length=824
E-Value5.6E-250
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4058763251388
Replicate 21.5363146646072
Replicate 30.9997805882788
Condition 2: 8 Hour
Replicate 11.5087567618328
Replicate 21.5500482919435
Replicate 31.2349619549172
Condition 3: 24 Hour
Replicate 11.9156065080883
Replicate 21.2457399116629
Replicate 32.2758717325272


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_91296.p1 GENE.R_Transcript_91296~~R_Transcript_91296.p1 ORF type:complete len:779 (+),score=159.80,Castor_Poll_mid|PF06241.8|1.1e-39,Castor_Poll_mid|PF06241.8|5.7e+03,Castor_Poll_mid|PF06241.8|1.7e+02 R_Transcript_91296:261-2597(+)
ATGCCAATACCCCCAAGCCCAAAACCGACCCCTTCCCCGCCCACCAAGCTACTGGAAAGAAGTCGCCCAAGACCTCTTTTGAGTAAATGCCATTCGTCCCTTTGTGGGTCCCCCAAAACTCGCCCTGTTTTCCGGCGTCTCTCCTCTTCTCTCTCCTCCACCTCCAATTCAGGTCCGGGCCTGGGTCCGGGCTCGGCGGATCCGGAACTGGGCCCGGAAACTAGCAGTGTGGAGGAGGCCCAATTGAAGAACGGTTGCAGTTCTGCTTTGAGTTTGGTGATTTGGGTCAGGAATTGGTACTTATTTTTTTTGCTTATTTGCACTTGTGTATCATCCATGTGCTATATAATGTCACTTTGTAAGAGACTTGCTGCACTTCAGGGTGAAATGGTTGAACTTCGCAGAATGTGTAAAGGAAACGATTATGTTGATAAGAACAACATTGAAGCCTTCCAGTGTAGAGATGACAAGTCAGCATATTATTTTGGTGAAGCTGATAGTAAAACTATTTGTTTATATATTGTATTCTTCACTCTTGTGATGCCTTTTATTGTGTACAAATATCTCGATTATCTTCCTCGACTGAAAAGCCTTTGTCTGAGGACAGAGAATTACAAAGAGGAGGTTCCACCGAAGAAGAAACTTGCATATATGGTTGATGTGTGCTTCTCTGTATATCCTTATGCGAAACTGCTTGCACTGCTCTTTGCAACAGTCTTTTTGATAGGATTTGGTGGCTTGGCATTGTATGCGGTAAGTGACAATAGCCTTGTAGAGGCTCTTTGGCTTTCATGGACTTTTGTTGCAGACTCTGGAAATCATGCTGACAGGGTGGGAACTGGTCCAAGGATCGTTTCTATATCTATTAGTGCTGGTGGTATGCTGATATTTGCCATGATGTTGGGGCTTGTTTCTGATGCTATATCTGAGAAGGTGGATTCACTGCGGAAGGGAAAGAGCGAAGTCATTGAAAGAAACCATGTATTGATCCTCGGATGGAGTGACAAATTGAGTGATGCAAGAGCTTTGAGGGTTGTTCTTAGCCTCACTGGAGTCAAAGAAGGACTACGAGGTCATGTTGCTGTGGAATTGAGTGATCTTGACAATGAGCCTTTGGTCAAGCTTGTTGGTGGAGAACTTGTTGAAACAGTTGTAGCTCATGATGTGATTGGGCGTTTGATGATACAGTGTGCACTTCAACCTGGACTTGCACAGATATGGGAGAATATCTTAGGATTTGAGAATGCCGAGTTTTATATCAAAAGGTGGTCCGAGCTAGATGGTTCATATTTTGAAGACGTGCTTCTCTCATTTCCTGATGCTGTGCCATGTGGAGTCAAAGTTGCTGCTGAGGATGGGAGGATCATTATGAATCCAGAAGACGATTATATTATAAGAGAAGGTGATGAGATACTTGTTATAGCTGAAGATGATGACACATATGCTCCAGGACCCCTGCCAAAGGTTCATAAAGGTCTCTTCCCAATGATTATTGACCCACCTAAATATCCGGAGAAGATATTGTTTTGTGGGTGGCGTCGAGATATTGAGGATATGATAATGGTACTCGAAGCACTTCTAGCTCCAGGATCAGAATTGTGGATGCTTAATGAGGTTACAGAAAAAGAAAGAGAGAAGAAGTTGACTGATGGTGGCCTTGATATCTCAAAACTACGGAACATAAAACTTGTGCATCGTGTGGGAAATGCTGTTATAAGACGACACCTCCAAGCACTTCCGTTGGAGTCATTTGATTCGATTTTAATTCTTGCAGATGAATCTTTGGAGGATTCAGTTGTACATTCTGATTCAAGGTGCCTTGCGACATTGCTTCTCATCCGAGATATTCAGTCAAAGCGTCTTCCTTGTAAAGACACAAAATCATCCAATTTAAGGCATCCAGGGTTTTGTCACAGCTCTTGGATTCGCGAAATGCAGCAAGCTTCTGACAAATCAATAATTATTAGTGAAGTCCTGGATTCTCGGACCAGGAACCTGGTGTCTGTTTCAAGAATAAGCGATTATGTATTATCAAATGAGTTAGTGAGTATGGCTCTGGCAATGGTGGCTGAAGACAAGCAAATTAATCGTGTTCTTGAGGAGCTCTTCGCAGAGAAGGGCAATGAGATGTGTATCAAACCAGCAGAGTTCTATCTGTATGACCAGGAAGAAATATCTTTCTATGATGTGATGATTAGAGGTCGACAAAGGCAAGAAATCGTGATAGGCTATCGCCTTGCTGATTCAGATAATGCAGTGATTAATCCTTCAAGGAAAGATGAACCCAGAAAATGGTCTATTGAGGATGTCTTTGTTGTCATCTCTCGGAGCTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_91296.p1 GENE.R_Transcript_91296~~R_Transcript_91296.p1 ORF type:complete len:779 (+),score=159.80,Castor_Poll_mid|PF06241.8|1.1e-39,Castor_Poll_mid|PF06241.8|5.7e+03,Castor_Poll_mid|PF06241.8|1.7e+02 R_Transcript_91296:261-2597(+)
MPIPPSPKPTPSPPTKLLERSRPRPLLSKCHSSLCGSPKTRPVFRRLSSSLSSTSNSGPGLGPGSADPELGPETSSVEEAQLKNGCSSALSLVIWVRNWYLFFLLICTCVSSMCYIMSLCKRLAALQGEMVELRRMCKGNDYVDKNNIEAFQCRDDKSAYYFGEADSKTICLYIVFFTLVMPFIVYKYLDYLPRLKSLCLRTENYKEEVPPKKKLAYMVDVCFSVYPYAKLLALLFATVFLIGFGGLALYAVSDNSLVEALWLSWTFVADSGNHADRVGTGPRIVSISISAGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIERNHVLILGWSDKLSDARALRVVLSLTGVKEGLRGHVAVELSDLDNEPLVKLVGGELVETVVAHDVIGRLMIQCALQPGLAQIWENILGFENAEFYIKRWSELDGSYFEDVLLSFPDAVPCGVKVAAEDGRIIMNPEDDYIIREGDEILVIAEDDDTYAPGPLPKVHKGLFPMIIDPPKYPEKILFCGWRRDIEDMIMVLEALLAPGSELWMLNEVTEKEREKKLTDGGLDISKLRNIKLVHRVGNAVIRRHLQALPLESFDSILILADESLEDSVVHSDSRCLATLLLIRDIQSKRLPCKDTKSSNLRHPGFCHSSWIREMQQASDKSIIISEVLDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEKGNEMCIKPAEFYLYDQEEISFYDVMIRGRQRQEIVIGYRLADSDNAVINPSRKDEPRKWSIEDVFVVISRSC*

Click here to download the sequence:
Link to NCBI Protein BLAST