Transcript Information: R_Transcript_91297.p1


Annotated TAIR IDAT5G49960.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1012 (InterPro:IPR010420); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1012) (TAIR:AT5G02940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20324173-20327687 | Reverse length=824
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5469247843794
Replicate 20.56152896462193
Replicate 32.4504882079605
Condition 2: 8 Hour
Replicate 11.7367880950953
Replicate 21.8460728031677
Replicate 33.0815525006703
Condition 3: 24 Hour
Replicate 12.0021343512533
Replicate 21.5130933424931
Replicate 32.0615163716729


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_91297.p1 GENE.R_Transcript_91297~~R_Transcript_91297.p1 ORF type:complete len:860 (+),score=186.65,Castor_Poll_mid|PF06241.8|1.3e-39,Castor_Poll_mid|PF06241.8|6.3e+03,Castor_Poll_mid|PF06241.8|2e+02 R_Transcript_91297:261-2840(+)
ATGCCAATACCCCCAAGCCCAAAACCGACCCCTTCCCCGCCCACCAAGCTACTGGAAAGAAGTCGCCCAAGACCTCTTTTGAGTAAATGCCATTCGTCCCTTTGTGGGTCCCCCAAAACTCGCCCTGTTTTCCGGCGTCTCTCCTCTTCTCTCTCCTCCACCTCCAATTCAGGTCCGGGCCTGGGTCCGGGCTCGGCGGATCCGGAACTGGGCCCGGAAACTAGCAGTGTGGAGGAGGCCCAATTGAAGAACGGTTGCAGTTCTGCTTTGAGTTTGGTGATTTGGGTCAGGAATTGGTACTTATTTTTTTTGCTTATTTGCACTTGTGTATCATCCATGTGCTATATAATGTCACTTTGTAAGAGACTTGCTGCACTTCAGGGTGAAATGGTTGAACTTCGCAGAATGTGTAAAGGAAACGATTATGTTGATAAGAACAACATTGAAGCCTTCCAGTGTAGAGATGACAAGTCAGCATATTATTTTGGTGAAGCTGATAGTAAAACTATTTGTTTATATATTGTATTCTTCACTCTTGTGATGCCTTTTATTGTGTACAAATATCTCGATTATCTTCCTCGACTGAAAAGCCTTTGTCTGAGGACAGAGAATTACAAAGAGGAGGTTCCACCGAAGAAGAAACTTGCATATATGGTTGATGTGTGCTTCTCTGTATATCCTTATGCGAAACTGCTTGCACTGCTCTTTGCAACAGTCTTTTTGATAGGATTTGGTGGCTTGGCATTATATGCGGTTAGTGACAATAGCCTTGCAGAGGCTCTTTGGCTTTCATGGACTTTTGTTGCAGACTCTGGAAATCATGCTGACAGGGTGGGAACTGGTCCAAGGATCGTTTCTATATCTATTAGTGCTGGTGGTATGCTGATATTTGCCATGATGTTGGGGCTTGTTTCTGATGCTATATCTGAGAAGGTGGATTCACTGCGGAAGGGAAAGAGCGAAGTCATTGAAAGAAACCATGTATTGATCCTCGGATGGAGTGACAAATTGGGTTCTCTTTTGAAGCAACTTGCTATAGCTAATAAAAGCCTTGGTGGTGGTGTCATTGTTGTTCTGGCAGAAAGAGACAAGGAGGAGATGGAGATGGATATTGCTAAGTTAGAATTTGATTTCATGGGAACATCAGTAATTTGTAGAAGTGGCAGTCCTCTTATACTCGCCGATTTAAGAAAGGTTTCAGTGTCAAAGGCACGTGCTATCATTGTGCTAGCATCTGATGAAAATTCTGATCAGAGTGATGCAAGAGCTTTGAGGGTTGTTCTTAGCCTCACTGGAGTCAAAGAAGGACTACGAGGTCATGTTGCTGTGGAATTGAGTGATCTTGACAATGAGCCTTTGGTCAAGCTTGTTGGTGGAGAACTTGTTGAAACAGTTGTAGCTCATGATGTGATTGGGCGTTTGATGATACAGTGTGCACTTCAACCTGGACTTGCACAGATATGGGAGAATATCTTAGGATTTGAGAATGCCGAGTTTTATATCAAAAGGTGGTCCGAGCTAGATGGTTCATATTTTGAAGACGTGCTTCTCTCATTTCCTGATGCTGTGCCATGTGGAGTCAAAGTTGCTGCTGAGGATGGGAGGATCATTATGAATCCAGAAGACGATTATATTATAAGAGAAGGTGATGAGATACTTGTTATAGCTGAAGATGATGACACATATGCTCCAGGACCCCTGCCAAAGGTTCATAAAGGTCTCTTCCCAATGATTATTGACCCACCTAAATATCCGGAGAAGATATTGTTTTGTGGGTGGCGTCGAGATATTGAGGATATGATAATGGTACTCGAAGCACTTCTAGCTCCAGGATCAGAATTGTGGATGCTTAATGAGGTTACAGAAAAAGAAAGAGAGAAGAAGTTGACTGATGGTGGCCTTGATATCTCAAAACTACGGAACATAAAACTTGTGCATCGTGTGGGAAATGCTGTTATAAGACGACACCTCCAAGCACTTCCGTTGGAGTCATTTGATTCGATTTTAATTCTTGCAGATGAATCTTTGGAGGATTCAGTTGTACATTCTGATTCAAGGTGCCTTGCGACATTGCTTCTCATCCGAGATATTCAGTCAAAGCGTCTTCCTTGTAAAGACACAAAATCATCCAATTTAAGGCATCCAGGGTTTTGTCACAGCTCTTGGATTCGCGAAATGCAGCAAGCTTCTGACAAATCAATAATTATTAGTGAAGTCCTGGATTCTCGGACCAGGAACCTGGTGTCTGTTTCAAGAATAAGCGATTATGTATTATCAAATGAGTTAGTGAGTATGGCTCTGGCAATGGTGGCTGAAGACAAGCAAATTAATCGTGTTCTTGAGGAGCTCTTCGCAGAGAAGGGCAATGAGATGTGTATCAAACCAGCAGAGTTCTATCTGTATGACCAGGAAGAAATATCTTTCTATGATGTGATGATTAGAGGTCGACAAAGGCAAGAAATCGTGATAGGCTATCGCCTTGCTGATTCAGATAATGCAGTGATTAATCCTTCAAGGAAAGATGAACCCAGAAAATGGTCTATTGAGGATGTCTTTGTTGTCATCTCTCGGAGCTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_91297.p1 GENE.R_Transcript_91297~~R_Transcript_91297.p1 ORF type:complete len:860 (+),score=186.65,Castor_Poll_mid|PF06241.8|1.3e-39,Castor_Poll_mid|PF06241.8|6.3e+03,Castor_Poll_mid|PF06241.8|2e+02 R_Transcript_91297:261-2840(+)
MPIPPSPKPTPSPPTKLLERSRPRPLLSKCHSSLCGSPKTRPVFRRLSSSLSSTSNSGPGLGPGSADPELGPETSSVEEAQLKNGCSSALSLVIWVRNWYLFFLLICTCVSSMCYIMSLCKRLAALQGEMVELRRMCKGNDYVDKNNIEAFQCRDDKSAYYFGEADSKTICLYIVFFTLVMPFIVYKYLDYLPRLKSLCLRTENYKEEVPPKKKLAYMVDVCFSVYPYAKLLALLFATVFLIGFGGLALYAVSDNSLAEALWLSWTFVADSGNHADRVGTGPRIVSISISAGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIERNHVLILGWSDKLGSLLKQLAIANKSLGGGVIVVLAERDKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLRKVSVSKARAIIVLASDENSDQSDARALRVVLSLTGVKEGLRGHVAVELSDLDNEPLVKLVGGELVETVVAHDVIGRLMIQCALQPGLAQIWENILGFENAEFYIKRWSELDGSYFEDVLLSFPDAVPCGVKVAAEDGRIIMNPEDDYIIREGDEILVIAEDDDTYAPGPLPKVHKGLFPMIIDPPKYPEKILFCGWRRDIEDMIMVLEALLAPGSELWMLNEVTEKEREKKLTDGGLDISKLRNIKLVHRVGNAVIRRHLQALPLESFDSILILADESLEDSVVHSDSRCLATLLLIRDIQSKRLPCKDTKSSNLRHPGFCHSSWIREMQQASDKSIIISEVLDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEKGNEMCIKPAEFYLYDQEEISFYDVMIRGRQRQEIVIGYRLADSDNAVINPSRKDEPRKWSIEDVFVVISRSC*

Click here to download the sequence:
Link to NCBI Protein BLAST