Transcript Information: R_Transcript_91302.p1


Annotated TAIR IDAT5G49960.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1012 (InterPro:IPR010420); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1012) (TAIR:AT5G02940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20324173-20327687 | Reverse length=824
E-Value5.3E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.85896286845735
Replicate 20.61753824753818
Replicate 30.26949103054297
Condition 2: 8 Hour
Replicate 10
Replicate 20.92074219346058
Replicate 30.53387090059962
Condition 3: 24 Hour
Replicate 10.40513777460654
Replicate 20.25947363400679
Replicate 30.77250722424343


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_91302.p1 GENE.R_Transcript_91302~~R_Transcript_91302.p1 ORF type:complete len:170 (+),score=28.08,Castor_Poll_mid|PF06241.8|4.9e-06 R_Transcript_91302:620-1129(+)
ATGAATCCAGAAGACGATTATATTATAAGAGAAGGTGATGAGATACTTGTTATAGCTGAAGATGATGACACATATGCTCCAGGACCCCTGCCAAAGGTTCATAAAGGTCTCTTCCCAATGATTATTGACCCACCTAAATATCCGGAGAAGATATTGTTTTGTGGGTGGCGTCGAGATATTGAGGATATGATAATGGTACTCGAAGCACTTCTAGCTCCAGGATCAGAATTGTGGATGCTTAATGAGGTTACAGAAAAAGAAAGAGAGAAGAAGTTGACTGATGGTGGCCTTGATATCTCAAAACTACGGAACATAAAACTTGTGCATCGTGTGGGAAATGCTGTTATAAGACGACACCTCCAAGCACTTCCGTTGGAGTCATTTGATTCGATGAATCTTTGGAGGATTCAGTTGTACATTCTGATTCAAGGTGCCTTGCGACATTGCTTCTCATCCGAGATATTCAGTCAAAGCGTCTTCCTTGTAAAGACACAAAATCATCCAATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_91302.p1 GENE.R_Transcript_91302~~R_Transcript_91302.p1 ORF type:complete len:170 (+),score=28.08,Castor_Poll_mid|PF06241.8|4.9e-06 R_Transcript_91302:620-1129(+)
MNPEDDYIIREGDEILVIAEDDDTYAPGPLPKVHKGLFPMIIDPPKYPEKILFCGWRRDIEDMIMVLEALLAPGSELWMLNEVTEKEREKKLTDGGLDISKLRNIKLVHRVGNAVIRRHLQALPLESFDSMNLWRIQLYILIQGALRHCFSSEIFSQSVFLVKTQNHPI*

Click here to download the sequence:
Link to NCBI Protein BLAST