Transcript Information: R_Transcript_91306.p1


Annotated TAIR IDAT4G21710.1
Annotated Gene NameDNA-directed RNA polymerase family protein
Annotated Gene Symbol(s)NRPB2, EMB1989, RPB2
Annotation TypeOrtholog
Chromosome Positionchr4:11535684-11542200 | Reverse length=1188
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.227261172478
Replicate 212.922141701393
Replicate 318.892350857956
Condition 2: 8 Hour
Replicate 118.039005156318
Replicate 220.485093580422
Replicate 328.433503014992
Condition 3: 24 Hour
Replicate 130.032015268799
Replicate 222.091895533253
Replicate 328.886680022824


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_91306.p1 GENE.R_Transcript_91306~~R_Transcript_91306.p1 ORF type:complete len:1204 (+),score=271.01,RNA_pol_Rpb2_6|PF00562.24|2.6e+02,RNA_pol_Rpb2_6|PF00562.24|2.9e-125,RNA_pol_Rpb2_1|PF04563.11|1.7e-74,RNA_pol_Rpb2_2|PF04561.10|1.3e+02,RNA_pol_Rpb2_2|PF04561.10|2.1e-57,RNA_pol_Rpb2_7|PF04560.16|4.2e-37,RNA_pol_Rpb2_3|PF04565.12|1.2e-25,RNA_pol_Rpb2_4|PF04566.9|7.3e-22,RNA_pol_Rpb2_5|PF04567.13|1.6e-18,RNA_pol_Rpb2_5|PF04567.13|6.6e+03 R_Transcript_91306:340-3951(+)
ATGAACGGAGGGGAATACGAGTACGAGAATGAGAACTACAACGACGAACCGATGATGATGATGGAGGAAGACGACGACGACGAGGAGGAGATCACACAAGAGGATGCTTGGGCTGTGATTAGTGCTTATTTTGAGGAGAAGGGTTTGGTTAGACAACAATTGGATTCTTTCGATGAGTTTATTCAGAATACTATGCAGGAGATCGTTGATGAGAGTGCCGACATCGAGATTCGCCCCGAGTCTCAGCATAATCCCGGCCACCAGTCTGATTTTGCTGAGACCATATATAAGATCAAGTTCGGTCAAATTTACTTGAGTAAGCCCATGATGACGGAGTCAGATGGTGAGACTGCAACATTATTTCCAAAAGCAGCCAGATTGAGGAATCTGACTTACTCAGCTCCGTTGTATGTTGATGTGACAAAGAGAGTTATAAAGAAAGGGCATGATGGAGAAGAAGTAACTGAAACTCAGGATCTCCCCAAAGTTTTTATTGGAAAGGTCCCAATTATGCTCCGCTCAAGTTACTGCACGTTGTATCAGAATTCTGAGAAGGATCTTACAGAGCTTGGTGAGTGCCCTTATGATCAAGGTGGGTACTTCATCATTAATGGAAGTGAAAAGGTTCTTATAGCTCAGGAGAAGATGAGCACAAATCATGTGTATGTGTTTAAGAAGAGGCAACCGAACAAGTTTGCCTTTATAGCAGAAGTTCGGTCCATGGCTGAGAATCAAAATAGGCCACCGAGTACCATGGTTGTGCGGATGCTCTCTCGAGCTGGTGCCAAAGGGGGTTCTTCTGGGCAATATATCCGTGCTACATTGCCGTACATTAAAGGAGACATTCCGATAATAATCGTATTCCGAGCGTTAGGCTTTGTTGCTGACAAGGATATATTAGAGCATATTTGCTATGATTTCTCTGATACTCAGATGATGGAACTGCTTCGTCCTTCACTGGAAGAGGCATTTGTGATACAGAATCAGCAAGTTGCACTTGACTACATTGGAAAAAGAGGAGCTACAGTTGGTGTTTCTAGGGAAAAGAGGATCAAATACGCCAAGGATATTCTCCAAAGGGAAATGCTTCCACATGTTGGTGTCGGTGAATATTGTGAGACCAAGAAAGCTTACTATTTTGGGTACATAATTCATCGACTCCTGCTATGTGCGCTAGGTCGCAGACCGGAGGATGATAGAGATCACTATGGAAATAAGAGATTGGACCTTGCTGGTCCATTGCTTGGAGGTCTATTTAGGATGTTGTTCAGAAAGTTGACCAGGGATGTGAGAGCATATGTTCAAAAGTGTGTTGATCAAGGGAAAGATCTTAATCTTAGCTTTGCCATCAAAGCTAAGACAATTACTAGTGGGCTTAAGTACTCTCTTGCCACTGGAAATTGGGGTCAAGCTAATGCTGCTGGTACGAGAGCTGGTGTTTCACAGGTGCTGAATCGTCTTACCTATGCCTCCACTTTATCACACTTGCGAAGGTTAAATTCTCCCATTGGACGTGAAGGAAAGTTGGCTAAACCTAGGCAGTTGCATAATTCCCAATGGGGAATGATGTGTCCTGCTGAAACGCCTGAAGGACAAGCCTGTGGGCTAGTGAAGAATCTTGCATTGATGGTTTATATAACTGTTGGTTCTGCTGCCTATCCTATACTGGAGTTTTTAGAGGAGTGGAGTACAGAGAACTTTGAAGAAATTTCTCCTGCTGTTATTCCCCAAGCTACCAAGATTTTTGTGAATGGTTGCTGGGTGGGCATTCATCGGGACCCTGATTTGTTAGTGAAGACATTGAGACAGCTAAGGAGGAGGGTTGATGTGAATACTGAGGTTGGAGTTGTTCGTGACATCCGCTTGAAAGAGTTGCGTATATATACAGACTATGGTCGTTGCAGTCGTCCACTGTTCATTGTTGAGAAACAGAGGCTTCTCATCAAGAAGAAGGATATCCGGGCATTGCAGCAAAGGGAGTCACCAGAGGATGGTGGGTGGCATGATCTTGTTTCAAAGGGATACATAGAATACATTGACACAGAAGAGGAAGAGACCACTATGATTTCCATGACTATTAATGATCTTGTGAGTGCGAGGATCAACCCAGAGGAGGCATACTCTGAGACTTACACTCACTGTGAAATCCACCCATCTTTGATATTGGGTGTTTGTGCCTCCATTATTCCATTCCCTGATCATAATCAGTCCCCCCGTAACACATATCAGTCAGCCATGGGGAAGCAAGCAATGGGAATTTATGTCACAAATTACCAGTTTAGAATGGATACATTGGCCTATGTCCTCTACTATCCCCAAAAGCCTCTTGTTACTACACGAGCCATGGAGCATCTGCATTTTAGGCAGCTTCCTGCTGGCATTAATTCTATTGTTGCCATTGCTTGCTACTCTGGCTATAACCAAGAAGATTCTGTTATCATGAATCAATCTTCAATTGACCGTGGCTTCTTCCGATCTCTATTCTTCCGTTCCTACAGGGATGAGGAGAAGAAAATGGGAACACTTGTCAAGGAGGACTTTGGTCGTCCCGACAGATCTAATACAATGGGCATGCGGCATGGATCTTATGACAAATTGGATGATGATGGGCTTGCTCCTCCTGGTACAAGAGTTTCGGGTGAGGATGTTATTATTGGAAAGACCACTCCGCTTGCCCAGGAAGAAGCTCAGGGACCAGCCTCACGTTACACACGACGTGACCATAGTATTAGCTTACGTCACAGTGAGACAGGAATTGTGGATCAGGTGTTACTGACAACAAATGCAGATGGCTTGAGATTTGTCAAAGTTAGGGTGAGATCTGTTCGGATTCCTCAGATTGGAGACAAGTTTAGCAGTAGACATGGTCAAAAAGGAACAGTTGGAATGACTTACACTCAGGAAGACATGCCATGGACGGTGGAAGGCATTACTCCTGATATCATTGTGAATCCCCATGCTATTCCATCACGTATGACAATTGGTCAGCTTATTGAGTGTATTATGGGGAAGGTTGCAGCCCATGTTGGAAAGGAGGGAGATGCTACACCTTTTACTGATGTCACTGTCGATAACATCAGTAAGGCACTGCACAAATGTGGGTATCAGATGCGTGGCTTTGAAACCATGTACAATGGTCACACAGGTCGGAAACTCACTGCAATGATATTCCTGGGACCAACTTACTACCAGCGACTAAAGCACATGGTTGATGACAAGATCCATTCTCGTGGTCGAGGACCGGTGCAGATTCTCACCAGGCAGCCTGCTGAGGGACGATCTCGTGATGGTGGTCTTCGATTTGGAGAAATGGAGCGAGACTGTATGATTGCCCATGGTGCTGCCCACTTCCTTAAAGAAAGGCTTTTTGACCAGAGTGATGCATATAGAGTTCATGTTTGTGAACGCTGTGGGTTGATTGCTATCGCAAACCTCAAAAAGAATTCATTTGAATGCAGAGGTTGCAAGAATAAGACTGACATTGTTCAGGTTCACATTCCCTATGCTTGTAAGCTGCTCTTCCAAGAGCTCATGTCCATGGCAATAGCACCAAGGATGTTTACTAAAGATGTCAATAAGATGGCTAAAGACCAGAAAAAGAAGGGAGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_91306.p1 GENE.R_Transcript_91306~~R_Transcript_91306.p1 ORF type:complete len:1204 (+),score=271.01,RNA_pol_Rpb2_6|PF00562.24|2.6e+02,RNA_pol_Rpb2_6|PF00562.24|2.9e-125,RNA_pol_Rpb2_1|PF04563.11|1.7e-74,RNA_pol_Rpb2_2|PF04561.10|1.3e+02,RNA_pol_Rpb2_2|PF04561.10|2.1e-57,RNA_pol_Rpb2_7|PF04560.16|4.2e-37,RNA_pol_Rpb2_3|PF04565.12|1.2e-25,RNA_pol_Rpb2_4|PF04566.9|7.3e-22,RNA_pol_Rpb2_5|PF04567.13|1.6e-18,RNA_pol_Rpb2_5|PF04567.13|6.6e+03 R_Transcript_91306:340-3951(+)
MNGGEYEYENENYNDEPMMMMEEDDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYKIKFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVTETQDLPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAFIAEVRSMAENQNRPPSTMVVRMLSRAGAKGGSSGQYIRATLPYIKGDIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVSREKRIKYAKDILQREMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDQGKDLNLSFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRDPDLLVKTLRQLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESPEDGGWHDLVSKGYIEYIDTEEEETTMISMTINDLVSARINPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINSIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPLAQEEAQGPASRYTRRDHSISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHVGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMFTKDVNKMAKDQKKKGA*

Click here to download the sequence:
Link to NCBI Protein BLAST