Transcript Information: R_Transcript_91677.p1


Annotated TAIR IDAT5G52450.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21289042-21291749 | Reverse length=486
E-Value4E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60843203182396
Replicate 20.97982735276058
Replicate 30.38177895993587
Condition 2: 8 Hour
Replicate 10.40809774912075
Replicate 20.52175390962766
Replicate 30.30252684367312
Condition 3: 24 Hour
Replicate 10.45915614455408
Replicate 20.58814023708206
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_91677.p1 GENE.R_Transcript_91677~~R_Transcript_91677.p1 ORF type:complete len:300 (+),score=28.41,MatE|PF01554.14|5.9e-34 R_Transcript_91677:106-1005(+)
ATGGAGAGCAAAGAAAACACACACCTTGAAAATCTGTTGATTAAAACAGAGGAAGGAAGAAGAAATGAAATTAGGTGGTTTGAAAACACTCGAAAATCCGAAATTTGTGAGGAAGCAAAGAGGCAAGTATGGCTAGCAGGGCCTCTAATAGCAGTGAGCTTATTGCAGTATTGTATTCAAATCATTTCAATTATGTTCGCTGGACATCTTGGGGAGCTGCCTTTATCAAGTGCTTCCATTGCCACTTCTTTTTCTTCTGTCACCGGTGCTAGCGTTCTGGCGGGCATGGGAAGTGCATTGGAGACGCTATGTGGACAATCCTACGGAGCTAAACAATACAAAATGCTTGGGATTTACACACAAAGAGCCATGATAAGCCTTGTAGCCACAAGCATCCCTCTAGCTATGATCTCATATTACACTGACAAAATTCTCATTCTCTGTGGCCAAAACCATGACATAGCAAAGGGTGCTGGAATTTTCAACCGTTGGATGATTCCATCACTTTTTGCTTACTCCCTCCTTCAATGTCTCAACAGATTTCTTCAAACTCAGAACATTGTCTTCCCAATGCTCATAAGTTCGGGTGTAACTGCTTCTCTACATGTTCTCGTTTGTTGGGTTCTCGTTTTCAAGCTTGGTCTCGGGATCAAGGGAGCTGCCATGGCCAACAATGTGTCATATAGCCTTAATGTTTTGTTGTTGGGAATTTATGTTGTGTCTTCCCCTGCTTGCCAGATCACTTGGACCGGGTTCTCAAGCGAAGCATTACATGATCTATGGAGTTATCTTAAACTTGCTATTCCTTCTGCAACCATGATTTGGTATTGTTGTTCATCATCTCAACAGTCATTCACATATTTCCTGATTATTCAGTTTACTTCATCCGTCCCTATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_91677.p1 GENE.R_Transcript_91677~~R_Transcript_91677.p1 ORF type:complete len:300 (+),score=28.41,MatE|PF01554.14|5.9e-34 R_Transcript_91677:106-1005(+)
MESKENTHLENLLIKTEEGRRNEIRWFENTRKSEICEEAKRQVWLAGPLIAVSLLQYCIQIISIMFAGHLGELPLSSASIATSFSSVTGASVLAGMGSALETLCGQSYGAKQYKMLGIYTQRAMISLVATSIPLAMISYYTDKILILCGQNHDIAKGAGIFNRWMIPSLFAYSLLQCLNRFLQTQNIVFPMLISSGVTASLHVLVCWVLVFKLGLGIKGAAMANNVSYSLNVLLLGIYVVSSPACQITWTGFSSEALHDLWSYLKLAIPSATMIWYCCSSSQQSFTYFLIIQFTSSVPI*

Click here to download the sequence:
Link to NCBI Protein BLAST