Transcript Information: R_Transcript_91720.p1


Annotated TAIR IDAT5G18440.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nuclear fragile X mental retardation-interacting protein 1, conserved region (InterPro:IPR019496); Has 1333 Blast hits to 1211 proteins in 205 species: Archae - 0; Bacteria - 137; Metazoa - 339; Fungi - 162; Plants - 70; Viruses - 6; Other Eukaryotes - 619 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6113092-6115748 | Forward length=470
E-Value1.8E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.5218245692522
Replicate 26.4219453654245
Replicate 38.0970702491894
Condition 2: 8 Hour
Replicate 16.7717318810147
Replicate 27.08504131598
Replicate 38.9428264778097
Condition 3: 24 Hour
Replicate 17.9048860051435
Replicate 27.1497817282641
Replicate 38.7390469262704


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_91720.p1 GENE.R_Transcript_91720~~R_Transcript_91720.p1 ORF type:complete len:546 (+),score=100.08,NUFIP1|PF10453.5|6.1e-12 R_Transcript_91720:234-1871(+)
ATGGTACCTGGAAATCCAAACAACATGTTGCCAGACCTTATGCATATCAATAACCCTCAGTCTCAGATGGGTTTTGTTAACCCACAACAAACACAACCATCAATGCCCTTCAACAATAATTCCAATTATACCCCCCATATGGGCAACCCTTATAGACCACCCCCTGGTCCTGTGAATGCTCCTCCTCTTTTGTTGGGTTCAGCTCCACAATTTGTTCAGGGTTTAAATGTTTCTGCCTTTCCCTTTAATGGGCAGTTGCCAAATTTTAGTCAAGGTAATCAGGCTCAGTTTTTTGGGCATAATAATAATAATAATATTCCATTGAACATGGGTCAGCCTTTTAACCAGGTTGGGTTACAGAATATGAATATGAATATGAACCAGTATGGGAACTTGCAGCCATTATTGAATTTGAATCCTACCCAAGTCGCAGCGTTGGCGCAATTGATGGGGTGTGCTAACCAAGTAGTAGCTCAGGCTATGATCCCTCAGAATACCGCCTTTGTCGGAAACACCCCACAGCTTGGTCTTGTCCAACCTAATAATGTCATGAGGCCACAGCTGCCTGTAGCTTCTCAACAGATGATGCAGAATTTTTCTCCTACTCAATGTAATCCTGCCTTGTCGAACCCACATCATAGTCAGTCCCCGGGTATGCAGGGAAATCCAGGTAAAATACACAGGATGCAAGATTCATATCAATACCGAAATAACAACTTTATGAAGAGGCCCCAAAGAGATACATCTAATCAGAGGTTCCAAAAGTCTCAAGATCATCATATGCATAATACGAAGAGAATTCACAAGATTTCTGACGAAATTGGAGGAAAAGGCCATAAAGGTCCCGATCCTGATAATAGTGCCAACCAGTCCAAGAGTGGAAAGCGAAGGTCGCTCGCTGCATTTTACACTGAGAAAGAAATCCAGCTGTGGCGTGAAGAGCGCAAGAAGAATTTCCCATCGAAATCCAATGTGGAAAAGAGGCTGGCAGAGAAGCAAGCAAACGCGGACGCTGCGGTTGAAGAGGCCAAATTAAGGCGTCAGCAACTCAAGGATGTATTGGCAAAACAAGCTGAATTGGGTTTTGAAGTTCCCGAAATTCCGTCACACTATTTAATGGATGCAGAAGACTTGCCCCATGGTAAGGACGGGAACAGAAAGCCATTCAACAGTGGGCGATTCCAGAAAAAGACTAATAAAAGGGGAAAATTTGACAAAAACAACTGTTTTGATAAGAAAAGAGGACCTGAAGGCGATGGTTCATCGAGGAGAAATGAGCGGTTTACAAAAAGAAAAAGGGTGGAGGAGGGTGTTGAATCATCAACGAATCCTCGGAGTATCAAGAAGCCAACACTTCTTCAAAAGCTTTTGAGCCCGGATATAAAAAGAGATGAGCATCGCCTGTTGCAAGCACTTCACTTCATGGTGATGAATTCTTTCTTCAAAGATTGGCCTGCGAAGGCTTTGGACTTCCCCAAGGTTATCGTCAAGGAAACTGAAGTCGGGAGTGAGGTGATCGAATCAAAACCCTTCTCTTCAGACAGACAACCTGCTGGTAGCATCGAGGATCACGACACTTCTGATGACAGTCATGGCGAGAATGATGGCTGTCAAGAAGAGGGAGAAATAACAGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_91720.p1 GENE.R_Transcript_91720~~R_Transcript_91720.p1 ORF type:complete len:546 (+),score=100.08,NUFIP1|PF10453.5|6.1e-12 R_Transcript_91720:234-1871(+)
MVPGNPNNMLPDLMHINNPQSQMGFVNPQQTQPSMPFNNNSNYTPHMGNPYRPPPGPVNAPPLLLGSAPQFVQGLNVSAFPFNGQLPNFSQGNQAQFFGHNNNNNIPLNMGQPFNQVGLQNMNMNMNQYGNLQPLLNLNPTQVAALAQLMGCANQVVAQAMIPQNTAFVGNTPQLGLVQPNNVMRPQLPVASQQMMQNFSPTQCNPALSNPHHSQSPGMQGNPGKIHRMQDSYQYRNNNFMKRPQRDTSNQRFQKSQDHHMHNTKRIHKISDEIGGKGHKGPDPDNSANQSKSGKRRSLAAFYTEKEIQLWREERKKNFPSKSNVEKRLAEKQANADAAVEEAKLRRQQLKDVLAKQAELGFEVPEIPSHYLMDAEDLPHGKDGNRKPFNSGRFQKKTNKRGKFDKNNCFDKKRGPEGDGSSRRNERFTKRKRVEEGVESSTNPRSIKKPTLLQKLLSPDIKRDEHRLLQALHFMVMNSFFKDWPAKALDFPKVIVKETEVGSEVIESKPFSSDRQPAGSIEDHDTSDDSHGENDGCQEEGEITD*

Click here to download the sequence:
Link to NCBI Protein BLAST