Transcript Information: R_Transcript_91818.p1


Annotated TAIR IDAT3G25070.1
Annotated Gene NameRPM1 interacting protein 4
Annotated Gene Symbol(s)RIN4
Annotation TypeHomolog
Chromosome Positionchr3:9132458-9133747 | Forward length=211
E-Value7E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.724007606929
Replicate 215.649762379257
Replicate 316.709158723984
Condition 2: 8 Hour
Replicate 117.861042070272
Replicate 222.598132576901
Replicate 323.640426563952
Condition 3: 24 Hour
Replicate 113.336232845802
Replicate 210.354856296107
Replicate 311.553456850643


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_91818.p1 GENE.R_Transcript_91818~~R_Transcript_91818.p1 ORF type:complete len:377 (+),score=92.10,AvrRpt-cleavage|PF05627.7|0.00011,AvrRpt-cleavage|PF05627.7|2.1e-05,AvrRpt-cleavage|PF05627.7|0.01,AvrRpt-cleavage|PF05627.7|0.073,AvrRpt-cleavage|PF05627.7|8.5e-12 R_Transcript_91818:366-1496(+)
ATGGCTTCCAAAGTTCCAAAGTTTGGTGCTTGGGAGGGTGGGGAAAACTATACAGTTTGCTTCGATAATGCTCGAAAGACCAAGAACAATGGAGCCATGATAAACCCAAACGACCCTGAAGAAAACCCAGATATGTTCCAACAGGATGGAGGTTCAGTTCAAGCTCCCCCGGCACACAACAGAACCGATTCAGAGGCATCACAGCAATCCAAAGTACCCCAGTTTGGCGCCTGGGACAGTGGAGACAATGTTGGTTACACTGTTTATTTTGAAAAGGCTCGGAAAACTAAGAATGTTCCGCCCACAAAGCCTGAAAACGAGCCCCAGCCAAACCGGAACACAAATCCTCGCAAGGAATCTTCAGCTCAGACTCGCCCTGCTGCAATCAAACCTGAGCCACAAGTAGCACAGTCCAAGGTACCACAGTTTGGCGCTTGGGAAGGGGAAGGGGAAGCTCAGTACACTATGTGCTTTGAAAATGTTCGGAAGAATAAGAATGGCGTTGCTGCCACAGAGGAGCCCTCTAAGGCAAATCAACCAAACCGGGGCATGAGTCCACCACAGAATGAGCCTCAAGCTGAAAAGCCTCGTTCTAAGGTGCCCCAGTTTGGCGCTTGGGATGGGGGAGAGAATGTTCAATACACGGCTTACTTTGATGGTGCTAGGAAGAATAAAGAGGAACCATTGGAGCCCCAGCTGAATCGTGATGTTGCTGATAGGTCTAGGCCGCCTTCTGCTGGAGGAGGGGCTAGGCCCAAGCCTGAGCAGAGGGGCACCAAAGAAGGAGGTCATTTGAGAAATGCAAGCCGTGGTTCAGAAAGCTCTCAGAAGCCAGGCCGACCAGCTCTTGGGGGTCAGTCACCGCTCAACTCAAGAGGAGGGAAGCCTCAACCAAAACCTGTTAGTCGAGGGAGTCAGAGTTCACAGCCTGAGAAAGGGACAGCCATTCCACAATGGGGTGTATGGAACACAGATCCAGCACAAGCTGAGGGTTTTACAGGTGCATTCACGAGGGCTCGGGAGGATAGAATGACACCGCAAAACAGAAACACTCCCTCTTCTTATCGCCAGCAAGGTCATCACTCCGATGAGGAGCCCAAGAAGGGATGCTGCTTTTCTTGTTTCGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_91818.p1 GENE.R_Transcript_91818~~R_Transcript_91818.p1 ORF type:complete len:377 (+),score=92.10,AvrRpt-cleavage|PF05627.7|0.00011,AvrRpt-cleavage|PF05627.7|2.1e-05,AvrRpt-cleavage|PF05627.7|0.01,AvrRpt-cleavage|PF05627.7|0.073,AvrRpt-cleavage|PF05627.7|8.5e-12 R_Transcript_91818:366-1496(+)
MASKVPKFGAWEGGENYTVCFDNARKTKNNGAMINPNDPEENPDMFQQDGGSVQAPPAHNRTDSEASQQSKVPQFGAWDSGDNVGYTVYFEKARKTKNVPPTKPENEPQPNRNTNPRKESSAQTRPAAIKPEPQVAQSKVPQFGAWEGEGEAQYTMCFENVRKNKNGVAATEEPSKANQPNRGMSPPQNEPQAEKPRSKVPQFGAWDGGENVQYTAYFDGARKNKEEPLEPQLNRDVADRSRPPSAGGGARPKPEQRGTKEGGHLRNASRGSESSQKPGRPALGGQSPLNSRGGKPQPKPVSRGSQSSQPEKGTAIPQWGVWNTDPAQAEGFTGAFTRAREDRMTPQNRNTPSSYRQQGHHSDEEPKKGCCFSCFG*

Click here to download the sequence:
Link to NCBI Protein BLAST