Transcript Information: R_Transcript_91830.p1


Annotated TAIR IDAT5G08110.1
Annotated Gene Namenucleic acid binding;ATP-dependent helicases;ATP binding;helicases;ATP-dependent helicases
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2594854-2600114 | Reverse length=1141
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3324063874538
Replicate 21.3328236867724
Replicate 31.5296337553902
Condition 2: 8 Hour
Replicate 11.4534066580393
Replicate 21.3641428328506
Replicate 31.9453498603877
Condition 3: 24 Hour
Replicate 12.2901027819886
Replicate 21.8000582276728
Replicate 32.6705525916412


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_91830.p1 GENE.R_Transcript_91830~~R_Transcript_91830.p1 ORF type:complete len:1213 (+),score=236.38,DEAD|PF00270.25|1.6e-25,DUF1998|PF09369.6|1.6e+04,DUF1998|PF09369.6|2.1e-22,Helicase_C|PF00271.27|1.2e+03,Helicase_C|PF00271.27|3.4e+03,Helicase_C|PF00271.27|1.8e-11 R_Transcript_91830:87-3725(+)
ATGGAGGAGAGAGAAATGGAAGTGCGAAGCTTAAGCGGTGAATCGATTACCGTATCGATTTCGACGAGCAAATCCATTCGAGACCTGAAGATTCTACTAAAGCAACGATTTCCTCCTGCTTCTTCTTCTACTTGTTCCGATTTTCACCTTTTCCTTCGAGGCATGAAACTAGGTGTACAAAGCCAAATAGGTAGTCTCTCCATCAATCAAGGAGAATTTATCGCTCTTATGCCATTTACAAAAAAGGGAAAATCTCAACATACTCAGGGATCTGAGGCTCCTTCACAAATATGTCATCAAAGTGTGCCTTCGAACCTAGCTGAATCGACATGGCGTGAAATGATGGAAGATCTTGCTCATCTGAACGAAACATCAGATTGCAATGAACAACCGGATCTTTTGCCAAGTTGTACTAGTCATACCATGAGTGAGAATAGTACCATGGGTTATTTGTCAAGAAAGCGTAAAAGGATGTCCAATACTGATAGCAAGGAACAGCTATCTGAGGAGGTTTTATCTAATATACTGCAGACCTCTGGAAAGCATATTCTGAATGAGGATTTTTGCAAAACTCTTCTAAATCTCTTGGAGTCTGTGCATTGTCTATCGGATGTGAAAACTGGGAAGTGTGTGCTGTTGAGCAAGGCCAACATTCCAGCAAGTGGTCAGCCGTCGTCTTCGTGCATTTGTCCACCTTGGCTAAAGACAGTGCTGAAGGCATTTACATTCTTGAACATTCTTTGTGGACTCTTGCAAATGCAGCAGGAAACAGTCACATTTAATCGTGTAAAGGATTCACTTGATAAACTTCGGGCGTATGGATTTTCTGCTAGAATCGAGGATCTGAAGCAACTGTCAGTTCTTTGCCCTAAGGTGGTGCATATAGTTGAGCGAGAAGAAGATATTAGAATGTCGCATAATGTCATTGTGATTTTCAACATCTCAAGCAAAAAGAGGGATGAGACTAGAGCTCGAAAGGTATCAATGTCAAAGATTATCAGTTCAATTAAGACAAGACAGGCACTCGTTATTGCAACTTTACAGAAGGCCCTCAGTTTGTTTATGCTGGAAGGAAGACATGGTTACAAAAATGTTGTTTCTTTGGATGATTTAATTATGTATATGAAGAAAGTTGATCCCCCAGCCCAAAGAATTGAAGCAGCAGAGGATAGGTCTTCATCAGAGAAATCAAAGTCCTGCTCTGTTGAAACACAATGTCATGAGACACATCCACTCTCACCTTCATCAATGCTTGAACATCTTCGAAAGGGATTTGGATCTAAAGGACAGATGGTACATGTAGAAGAAATTAGTGCAAGAATGGCAGACCTTACGGAAGTCCCAGAGGATTTTTCAGAATATGTGAAGTCTGCTCTGAACTCTCTTGGAATTACTAAGTTGTACAGCCATCAGGCTGAGTCCATAAAGGCTTCCTTATCTGGCAGAAATGTTGTCGTTGCAACCATGACATCTAGTGGGAAATCTCTTTGCTACAATCTACCAGTTCTAGAAGCATTATCTCAGAATCAACTATCATGTGCTCTCTACTTGTTCCCAACAAAGGCCTTAGCTCAGGATCAATTACGAGCTTTGCTGGCTATGACTGAAAATTTTGAACCCTTAAGCATTGGTGTGTATGATGGTGACACATCTCAGGCAGAGAGGAATTGGCTCCGCGATACTGCCAGACTGTTGATCACAAATCCAGATATGCTTCACATGTCAATCTTGCCATATCATGGACAGTTTCAGCGCATTCTATCAAATCTCAAGTTTGTGGTCATTGATGAAGCTCATGCTTATAAGGGAGCATTTGGATGTCATACTGCCCTTATACTGAGGAGACTACGCCGCTTATGTTCTCATGTGTATGGGTCTGATCCTTCTTTTGTATTTTCAACTGCAACTTCTGCCAATCCCCGAGAGCATGTAACGGAACTTGCAAATTTACCAACAGTTGAGCTAATTGACAAAGATGGAAGTCCTTCAGGTTCAAAGCTCTTCATTATGTGGAATCCACCTTTGTGTTCAGTAACTGTCCCGCAGACTGGGAAAAAGGACAAAAATGCCATCACAAGACGATCAAGCCCTATAATGGAAGTTTCACGTCTCCTAGCTGAAATGGTGCAGCATGGACTTCGCAGCATTGCTTTCTGCAAAAGTCGCAAACTTTGTGAACTTGTCTTATCTTACACACGGGAGATTCTTCAGGATACAGCACCTCATCTTGTTGACTCCATATGTGCTTACCGTGCTGGCTACATTGCTGAGGATAGGAGGAGAATAGAGAATGAATTTTTTAGTGGGAAGCTATGTGGAATTGCTGCTACAAATGCTCTTGAGTTGGGTATTGATGTTGGACACATTGATGTGACTCTGCATCTAGGGTTCCCGGGCAGCATTGCTAGCCTCTGGCAGCAGGCTGGTAGATCTGGAAGGAGGGGTAGACCATCACTTGCTGTGTATGTTGCTTTTGAAGGACCTCTGGATCAATATTTTATGAAATTTCCACAGAAGCTATTCGGGCGCAATGTAGAGTGCTGTCATGTAGATGCTCGAAACCCAAAGGTTCTTGAGCAACACCTCATCTGTGCTGCTGTAGAGCATCCCCTGAGTTTGATATATGATGGCAAGTATTTTGGTTCTGGTTTAGATAGTGCCATTTTGGCACTTCAAATGAGGGGGTACCTATCTTATGATCCCTCCTGTGATTCTGTGGATAAAATATGGACTTACATAGGTCATGAGAAATCACCATCACGGGTAATTAGCATTCGTGCAATTGAATCTGAGAAGTACCAAGTAGTTGATAAACAAACTAACGAAGTTATTGAAGAGATTGAAGAAAGCAGGGCTTTCTTCCAGGTATATGAAGGCGCAGTCTACATGAATCAGGGAAAGACTTATCTAGTGAAAGGGTTGGATTTATCAAGTAAAACTGCCATTTGTCAAAAAGCCGATTTGAAGTACTATACGAAGACTCGTGACTACACCGACATTGATGTTGGCCGTCTTGCTTATCCAACCAGAGGTTCCAAGACCCAAGTTTGCAGAACCACTGCCCAATCAAGATCCTGCAGAGTAACCACTACTTGGTTTGGCTTTCGCCGTATATGTAAGAGAAGCCATAGAGTAATCGATACAGTTGAACTTGTACTTCCTAAATATTCATATGAATCAGAGGCAGTCTGGATTGAAGTTCCTCCATCTGTTAAAACAGCAGTAGAGAGAGAGAATTTATCGTTTCGTGGAGGCTTGCATGCTGCTTCCCATGCAGTCCTCAATGTCGTGCCTTTATACATAATGTGTGAGTCCTCGGATTTGGCTCCAGAGTGTGCAAATCCTCATGAGGCCCGCTACGTACCCGAGAGGATCTTAGTCTATGATCAGCGTCCTGGAGGGACAGGTCTGTCAAAGCAGATTCAACCACTTTTAAATGATCTTTTAGCTGCTGCTTTGGATATGCTCACATCATGCCACTGCTCTTCAGAAACAGGATGCCCCAATTGTGCCCATAGTCTAGCATGTCAGGAGTACAATGAACTTCTGCATAAGGAAGCTGCAATCATGATTATCAAGGGTGTTTTAGATGCAGAAGAGTCGTACTTCCGTGAAGTGCCTGGACCTTCAGAAATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_91830.p1 GENE.R_Transcript_91830~~R_Transcript_91830.p1 ORF type:complete len:1213 (+),score=236.38,DEAD|PF00270.25|1.6e-25,DUF1998|PF09369.6|1.6e+04,DUF1998|PF09369.6|2.1e-22,Helicase_C|PF00271.27|1.2e+03,Helicase_C|PF00271.27|3.4e+03,Helicase_C|PF00271.27|1.8e-11 R_Transcript_91830:87-3725(+)
MEEREMEVRSLSGESITVSISTSKSIRDLKILLKQRFPPASSSTCSDFHLFLRGMKLGVQSQIGSLSINQGEFIALMPFTKKGKSQHTQGSEAPSQICHQSVPSNLAESTWREMMEDLAHLNETSDCNEQPDLLPSCTSHTMSENSTMGYLSRKRKRMSNTDSKEQLSEEVLSNILQTSGKHILNEDFCKTLLNLLESVHCLSDVKTGKCVLLSKANIPASGQPSSSCICPPWLKTVLKAFTFLNILCGLLQMQQETVTFNRVKDSLDKLRAYGFSARIEDLKQLSVLCPKVVHIVEREEDIRMSHNVIVIFNISSKKRDETRARKVSMSKIISSIKTRQALVIATLQKALSLFMLEGRHGYKNVVSLDDLIMYMKKVDPPAQRIEAAEDRSSSEKSKSCSVETQCHETHPLSPSSMLEHLRKGFGSKGQMVHVEEISARMADLTEVPEDFSEYVKSALNSLGITKLYSHQAESIKASLSGRNVVVATMTSSGKSLCYNLPVLEALSQNQLSCALYLFPTKALAQDQLRALLAMTENFEPLSIGVYDGDTSQAERNWLRDTARLLITNPDMLHMSILPYHGQFQRILSNLKFVVIDEAHAYKGAFGCHTALILRRLRRLCSHVYGSDPSFVFSTATSANPREHVTELANLPTVELIDKDGSPSGSKLFIMWNPPLCSVTVPQTGKKDKNAITRRSSPIMEVSRLLAEMVQHGLRSIAFCKSRKLCELVLSYTREILQDTAPHLVDSICAYRAGYIAEDRRRIENEFFSGKLCGIAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRSGRRGRPSLAVYVAFEGPLDQYFMKFPQKLFGRNVECCHVDARNPKVLEQHLICAAVEHPLSLIYDGKYFGSGLDSAILALQMRGYLSYDPSCDSVDKIWTYIGHEKSPSRVISIRAIESEKYQVVDKQTNEVIEEIEESRAFFQVYEGAVYMNQGKTYLVKGLDLSSKTAICQKADLKYYTKTRDYTDIDVGRLAYPTRGSKTQVCRTTAQSRSCRVTTTWFGFRRICKRSHRVIDTVELVLPKYSYESEAVWIEVPPSVKTAVERENLSFRGGLHAASHAVLNVVPLYIMCESSDLAPECANPHEARYVPERILVYDQRPGGTGLSKQIQPLLNDLLAAALDMLTSCHCSSETGCPNCAHSLACQEYNELLHKEAAIMIIKGVLDAEESYFREVPGPSEI*

Click here to download the sequence:
Link to NCBI Protein BLAST