Transcript Information: R_Transcript_91939.p1


Annotated TAIR IDAT5G17280.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Oxidoreductase-like, N-terminal (InterPro:IPR019180); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5686355-5686762 | Forward length=135
E-Value8.2E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.232718374782
Replicate 28.9618355435419
Replicate 37.8218128377106
Condition 2: 8 Hour
Replicate 14.9270338003603
Replicate 24.6357925768312
Replicate 36.7515137063634
Condition 3: 24 Hour
Replicate 17.1393181012982
Replicate 28.0689971550892
Replicate 37.7407736087808


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_91939.p1 GENE.R_Transcript_91939~~R_Transcript_91939.p1 ORF type:complete len:164 (+),score=25.79,Oxidored-like|PF09791.5|3.9e-15 R_Transcript_91939:223-714(+)
ATGGAAACGGCATTGAAATTCCATCCGAAATCGAAACCTTTCAATTTCATCACTACAAATCCAAAATCCACATCAATTTATGGGTTCGGGTTTGGGTTGTCTCTTCCCTTCATGAGAGATCTTGTCCCACTAAGGCTAACTTGCTTCAATCGCAATTACTATCATCCCAAAAAATTCCTCCAAAACCCTCTTAATTCACTTTCTCTGATCAAACCGGCCTTTTTGTCTCCGTCAATGTCCGAGAGGAGAGAGAATACTATCAATCTGGGGGAAAAGGAGAAGGAGAAGGAAAAAGGAAAGGATGTCCGGCCGCCGGTGAAGGAGTTGCCGCCACCGCCGGAGAAGCCGGAGCCCGGGGATTGCTGTGGAAGCGGGTGTGTTCGATGCGTCTGGGATATTTATTATGAGGAGCTTGAGGCTTATAATCAAATCCTTGAGCAATTCAACTCTCAACCCCCGCCTTCCATTTCTCAAAAGATTGTTGATTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_91939.p1 GENE.R_Transcript_91939~~R_Transcript_91939.p1 ORF type:complete len:164 (+),score=25.79,Oxidored-like|PF09791.5|3.9e-15 R_Transcript_91939:223-714(+)
METALKFHPKSKPFNFITTNPKSTSIYGFGFGLSLPFMRDLVPLRLTCFNRNYYHPKKFLQNPLNSLSLIKPAFLSPSMSERRENTINLGEKEKEKEKGKDVRPPVKELPPPPEKPEPGDCCGSGCVRCVWDIYYEELEAYNQILEQFNSQPPPSISQKIVDS*

Click here to download the sequence:
Link to NCBI Protein BLAST