Transcript Information: R_Transcript_91989.p1


Annotated TAIR IDAT1G54350.1
Annotated Gene NameABC transporter family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20286917-20290245 | Forward length=706
E-Value3e-308
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.6681561377854
Replicate 23.6765067760413
Replicate 34.1677101235134
Condition 2: 8 Hour
Replicate 13.2156539465602
Replicate 24.6801845714109
Replicate 35.2890465966381
Condition 3: 24 Hour
Replicate 16.8779203595995
Replicate 25.3403294440933
Replicate 36.3776759210795


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_91989.p1 GENE.R_Transcript_91989~~R_Transcript_91989.p1 ORF type:complete len:731 (+),score=114.82,ABC_membrane_2|PF06472.11|4.4e-61,SbmA_BacA|PF05992.8|2.6e-18,ABC_tran|PF00005.23|3.9e+02,ABC_tran|PF00005.23|1.1e-17,ABC_membrane|PF00664.19|2.2e-09 R_Transcript_91989:78-2270(+)
ATGGTACCAGCTGATACTTCAACAACTTCTGTATTCACCAAATGCTACCAATTTATCCCAATGTCTCTTCATAATAGAAGGAGAAAAAATCCAACCTTACCCATCCAACCAAAAAACCCACTCAAACATCCTTCTTCTTTGCAGTTTTCAAATACCCATTTGCCCAATTTCAATTCCCAGAAACGGATTCTCAATTTAAAGGCTTCATCTTCCACTACTCCAACTTCAGATAATAGAGAATTACCTGATATTAAGACGTTATTGAGGAGGTTTTGGAAAGTGGCAAAACCATATTGGTCATCAGAAGATAAGGTTCAAGCTAGATTGAGATTGGCTGCTGTTTTTGCCTTGACATTGGGAACTACTGGGATTAGCGTTGCCTTTAATTTCCTTGGCCGTGATTTTTACAATGCTCTTGCCAACAAAGATCAAGAACAATTCATGAAGCAGCTACTATACTATCTTGGTGGATTTGCAGGTGGTATTCTGGTTTTTGTGTTGAGAGATTATGCAAAAGACACTCTTTCTTTGAGATGGAGGTCTTGGATGACCACCTATTATATGCAGCGCTACTTAAAAGATAGGACGTTCTACAAAATTCAGTCCCAGTCTACAATTGATAATCCAGATCAAAGGATTGTTGATGATTTGAGTTCATTCACAGGAACAGCGCTTGCCTTTTCCCTGACAATCTTTAATGCTGCAGTAGACTTGATATCCTTCAGTAACATCCTATTTGGCATCTATCCTCCACTATTTGTTGTGCTTTTGGCATATTCGATAGGTGGGACAGCTATAAGCGTATATCTTGGAAAGGGGCTGGTAACTTTGAATTTCTTGCAAGAGAAGAAAGAAGCTGACTTCCGTTATGGACTTGTACGTGTGAGGGAAAATGCTGAATCAATTGCGTTTTATGGTGGCGAGGAAAATGAAATGCAAATGCTAGTCCAGAGGTTCAGCAGTGCTTATCAGAATTTAATGCGTTTGTTGATATCTTCAAGAAATTTGGAGTTCTTCACCAGTGGCTACCGATATTTGATACAGATTCTTCCTGCAGCACTTGTTGCTCCCATGTATTTTTCAGGAAAGATTGAATTCGGCGTCATTAATCAGTCTGTATCGGCTTTTAATCACATCCTTGGTGATGTTTCCCTCATTGTTTACCAGTTTCAGGCAATCAGTGCCTTCTCTGCCGTGATTGACCGTTTAGGTGAATTTGATGATATTCTCGATAACAACTCAGAGAATCTGTCTGATCCTATGGAGAAGGTTTCTCTAGTGTACTCCAGTGTGATGAGTCCATCGAGTCTTACTCTTTTGGATGCCAATGGTTCAGTGACAGTGGAAAACAGCAAAAAGTTGGTCGATATAGAGAATTTAACACTGGTGACTCCTGAGAAAGCTACTCTCCTAATAAACTTAACTTTGTCAATAAATGAAAAGGATCACCTGTTGATAACTGGGCCAAGTGGGGCTGGTAAGACATCCTTGTTAAGAGCTATGGCTGGTCTCTGGAGCTCTGGAAGAGGAAAAATCACATTTTATGTCAAAGATTCAGATGAGTTACAGCCAAATAAACCTGAAAATGCTGAAGCACATAAATCATACAGGAATAGAGATGGCATATTTTTCCTTCCCCAAAAGCCATATATGGTTTTGGGAACTCTACGTCAGCAATTGCTTTATCCCACGTGGGCAGAAACCGTGACATCAGAGGGTCTTGAACAAACTGATTGTCCCCCTTTCTTGATGCGCCTTGAGGACGCTACTGATATGGCTGCAAGGCCTGGGAAGCCCACTAGTGAGGAATTAGTAAAGGTCCTACAGGATGTTCGCCTTGGTTATTTGTTGCCTCGGTTCGGTCTTGATTCAATATGCGAATGGTCAAGTATTCTTTCCCTGGGTGAGCAGCAACGCCTTGCCTTTGCACGTCTGCTACTAGCGAAACCATATCTGATTCTGATGGATGAATCAACCAGCGCTCTGGATGAGGATAATGAGGCTCATCTATACCGTCTGGTCGAAGCTGCTGGTGTAACTTATGTTAGCATAGGCCACAGAAGATCACTATTTAACTACCACAGCAAAGTTTTGCATATAAGGAAAAAGGATTCAGAATCTACCGAACTCAACTGGTACGTGAAGCCCATAGATCAAGAAACCGGAAGCAGCTTAGTGGAACTGGGTTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_91989.p1 GENE.R_Transcript_91989~~R_Transcript_91989.p1 ORF type:complete len:731 (+),score=114.82,ABC_membrane_2|PF06472.11|4.4e-61,SbmA_BacA|PF05992.8|2.6e-18,ABC_tran|PF00005.23|3.9e+02,ABC_tran|PF00005.23|1.1e-17,ABC_membrane|PF00664.19|2.2e-09 R_Transcript_91989:78-2270(+)
MVPADTSTTSVFTKCYQFIPMSLHNRRRKNPTLPIQPKNPLKHPSSLQFSNTHLPNFNSQKRILNLKASSSTTPTSDNRELPDIKTLLRRFWKVAKPYWSSEDKVQARLRLAAVFALTLGTTGISVAFNFLGRDFYNALANKDQEQFMKQLLYYLGGFAGGILVFVLRDYAKDTLSLRWRSWMTTYYMQRYLKDRTFYKIQSQSTIDNPDQRIVDDLSSFTGTALAFSLTIFNAAVDLISFSNILFGIYPPLFVVLLAYSIGGTAISVYLGKGLVTLNFLQEKKEADFRYGLVRVRENAESIAFYGGEENEMQMLVQRFSSAYQNLMRLLISSRNLEFFTSGYRYLIQILPAALVAPMYFSGKIEFGVINQSVSAFNHILGDVSLIVYQFQAISAFSAVIDRLGEFDDILDNNSENLSDPMEKVSLVYSSVMSPSSLTLLDANGSVTVENSKKLVDIENLTLVTPEKATLLINLTLSINEKDHLLITGPSGAGKTSLLRAMAGLWSSGRGKITFYVKDSDELQPNKPENAEAHKSYRNRDGIFFLPQKPYMVLGTLRQQLLYPTWAETVTSEGLEQTDCPPFLMRLEDATDMAARPGKPTSEELVKVLQDVRLGYLLPRFGLDSICEWSSILSLGEQQRLAFARLLLAKPYLILMDESTSALDEDNEAHLYRLVEAAGVTYVSIGHRRSLFNYHSKVLHIRKKDSESTELNWYVKPIDQETGSSLVELGS*

Click here to download the sequence:
Link to NCBI Protein BLAST