Transcript Information: R_Transcript_91997.p1


Annotated TAIR IDAT5G02640.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:594334-594819 | Reverse length=161
E-Value5E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 155.845368635271
Replicate 244.492160405965
Replicate 349.631264791664
Condition 2: 8 Hour
Replicate 128.129594850109
Replicate 249.114079758318
Replicate 343.218120524731
Condition 3: 24 Hour
Replicate 141.95265963634
Replicate 254.481740711843
Replicate 356.152385238409


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_91997.p1 GENE.R_Transcript_91997~~R_Transcript_91997.p1 ORF type:5prime_partial len:168 (+),score=29.24 R_Transcript_91997:2-505(+)
ACATCAACCCCACCAAGATTACACACCTCTCTTTTAATTCCCTTCCAAACAAGCAAAAATACTAACCAAGAAGAAGAGAAAAAAAGACACAACATGTCGTCGACCTTCATATCATCCACCAATGAACCAACTAAGGTCCCAATCGCTCGACCAAACTACTGTGAGAGCCCCTACAAGTGGCCGGAATCCGAGGATCGGTTTTCGAGACCGATCAAGACGGCTAGAGTTGGTGGTGAAGTGAAGGTGGTGGATAGCAAATCATGCAGGCAGTTGTATGTGAGAAGTGCATATACCTTCTCAAGGGCAAAAGAGAATAAGGATATTGATGTAAAAGAGAGGGCTAAGAAGTGCTTAGACAGGGTTAAAAGTAAAGTCATGAGGAATGATAGTTACAAAGATGTGGTAATTGTGAGGAAGGTCAAGCATTTCTCTTGTAATTCTCTCTTGTCTATACTTCGTAGGATGCTTGTTTGTACTGCCAAGGTTGATGTTGCTGCCCACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_91997.p1 GENE.R_Transcript_91997~~R_Transcript_91997.p1 ORF type:5prime_partial len:168 (+),score=29.24 R_Transcript_91997:2-505(+)
TSTPPRLHTSLLIPFQTSKNTNQEEEKKRHNMSSTFISSTNEPTKVPIARPNYCESPYKWPESEDRFSRPIKTARVGGEVKVVDSKSCRQLYVRSAYTFSRAKENKDIDVKERAKKCLDRVKSKVMRNDSYKDVVIVRKVKHFSCNSLLSILRRMLVCTAKVDVAAH*

Click here to download the sequence:
Link to NCBI Protein BLAST