Transcript Information: R_Transcript_92.p1


Annotated TAIR IDAT1G17980.1
Annotated Gene Namepoly(A) polymerase 1
Annotated Gene Symbol(s)PAPS1
Annotation TypeOrtholog
Chromosome Positionchr1:6187742-6191418 | Reverse length=713
E-Value4.9e-312
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.486753249846
Replicate 210.167499807892
Replicate 315.722078428855
Condition 2: 8 Hour
Replicate 115.167097447637
Replicate 216.638608929071
Replicate 321.700941306001
Condition 3: 24 Hour
Replicate 120.457153684529
Replicate 218.350438499509
Replicate 319.532334891194


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_92.p1 GENE.R_Transcript_92~~R_Transcript_92.p1 ORF type:complete len:762 (+),score=146.61,PAP_central|PF04928.13|1.4e-109,PAP_RNA-bind|PF04926.11|3.6e-12,PAP_RNA-bind|PF04926.11|7.4e-06,PAP_RNA-bind|PF04926.11|4.7e+03,NTP_transf_2|PF01909.19|2e-11 R_Transcript_92:298-2583(+)
ATGGCGAGCTCTGGAGCTAATAGTCGATATAACTCACAGCGCTTAGGCATAACAGACCCTATCTCATTAGGGGGACCATCAGAGTATGACGTGATCAAAACTCGGGAACTTGAAAAGTACTTGGAGAATGTGGGATTGTATGAGAGTCAGGGGGAGGCTGTTTCTAGGGAGGAAGTGCTTGGGAGACTAGACCAGATTGTGAAGGTTTGGGTGAAAACAATTAGTCGTGCCAAGGGATTGAATGAGCAGTTGGTGCAAGAAGCAAATGCAAAGATCTTCACATTTGGTTCATACAGGCTTGGGGTACATGGTCCTGGAGCCGATATAGACACACTATGTGTGGGGCCTAGGCATGCTACGCGTGATGAAGATTTCTTTGGTGAACTTCATAGGATGCTATCTGAGATGCCGGAAGTTTCAGAATTGCACCCTGTACCCGATGCCCATGTTCCGGTGATGAAATTCAAGTTTAGTGGTGTCTCTATAGATCTTCTTTATGCAAAATTGGCACTTTGGGTGATTCCTGAAGATCTAGATATCTCCCAAGATTCAATATTGCAAAATGCAGATGAGCAGACTGTTCGTAGTCTTAATGGTTGTAGAGTTACAGATCAAATACTGCGCTTGGTCCCAAATATACAGAACTTCCGTACAACACTAAGATGCATGAGATTTTGGGCAAAACGACGTGGTGTCTATTCAAATGTTGCTGGGTTTCTTGGTGGTATTAATTGGGCTCTACTTGTTGCTCGAATTTGTCAGCTATACCCCAATGCATTGCCCAATATGCTAGTATCACGGTTTTTTAGGGTTTATACTCAGTGGAGGTGGCCAAATCCTGTTATGCTTTGTGAGATTGAAGAGGGATCTCTTGGTCTGCAAGTTTGGGATCCTAGGAGGAATCCGAAGGACAGATACCATTTGATGCCTATAATAACTCCTGCATATCCATGCATGAACTCTAGTTATAATGTCTCATCTAGTACTCTGCGGATTATGTCGGAAGAGTTCCAGAGGGGATGTGAAATGTGCGAGGCTATGGAGGCTATTAAGGCTGAGTGGGATACACTTTTTGAGCCTTATCCCTTTTTTGAAGCATATAAGAACTATCTGCAGATAGACATTAATGCTGAAAATGCCGATGACTATCGAAAGTGGAAGGGATGGGTGGAGTCTCGTCTTCGTACACTTACATTAAAGATAGAGAGGCATACTTATAACATGCTTCAGTGCCATCCTCACCCTGGTGAATTCTCAGATAAATCCAAACCTTTTCATTGCTGCTATTTCATGGGTTTGCAACGTAAAAAGGAGGTTCCAGGTGCTGAAGGTGAACAGTTTGATATAAGGATGACTGTGGAAGAATTTAAGCAAACTGTTAATATGTATACTTTGTGGAAGCCTGGAATGGAGATCCGTGTAAGCCATGTAAAACGGAGAAATATACCTGCCTTCGTATTCCCCGGGAGTATTAGACCTTCCCGTTCTACTAAATCGTCTGGAGAAAGTAGGCGATCTTTAGAGATGAAGAATTCTGGACATGCCATCCCAAACTTATCATCTGAAGGAAAATCTGGTATTGATAAACTAGATGATACAAGGAAGAGAAAAAGGGAGAACGATGATACTTTTTCTAGTTTGAAAGTCACTGGGTGCTCGGCTTCTGTAGCTTCATCGAGTGGGGGGGTTCATGTGGGTAGTCCTGTCAGCACTGCCACTTCTTTAATGAAGGCAGATACAGAAACCAATGGATCTGGGGAGACAAAGGGAAATACAGGTGCAGAAATCACACATGTGAAGAGTGGTGAACTCAATGTGTCAGGGCAGCAAAGCCCACCTGTCAACACTTCATTGGCTCCAGCTTCTTCATCAACATCTAAAGAGGCTGAGAAGCTGGCAATTGAGAAGATCATGTCCGGTCCATATGCTGCTCACCAAGCTGTACCTGAACTTGATGAGCTTGATTACAACTTGGAAGATGTTAATCAAGTCCAGCATTTTGGAAGTGGGAATAAGCAGATAGAAGATGGTTCTGCTGTGAAGGCATCTGAGGAAGTGGCCGTGCCTGACACTATTGTTTCTCACTCTGCTTCATATAGCAGTGGGGCCTTGGAGGAGCTTGAGGTCGTGTTCTTTTCTTGCACCGCTTTATTACGGTTATATATGATCGTCAATGTGCAATTTAATTTGGATATCCTGCATACAATATTCTTTTTCACCTTTGTACTCAAGCAAGCTCATTTCCGTGTTGACCCATATATCCATCTCAAATTGAAGTGCCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_92.p1 GENE.R_Transcript_92~~R_Transcript_92.p1 ORF type:complete len:762 (+),score=146.61,PAP_central|PF04928.13|1.4e-109,PAP_RNA-bind|PF04926.11|3.6e-12,PAP_RNA-bind|PF04926.11|7.4e-06,PAP_RNA-bind|PF04926.11|4.7e+03,NTP_transf_2|PF01909.19|2e-11 R_Transcript_92:298-2583(+)
MASSGANSRYNSQRLGITDPISLGGPSEYDVIKTRELEKYLENVGLYESQGEAVSREEVLGRLDQIVKVWVKTISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELHRMLSEMPEVSELHPVPDAHVPVMKFKFSGVSIDLLYAKLALWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLQVWDPRRNPKDRYHLMPIITPAYPCMNSSYNVSSSTLRIMSEEFQRGCEMCEAMEAIKAEWDTLFEPYPFFEAYKNYLQIDINAENADDYRKWKGWVESRLRTLTLKIERHTYNMLQCHPHPGEFSDKSKPFHCCYFMGLQRKKEVPGAEGEQFDIRMTVEEFKQTVNMYTLWKPGMEIRVSHVKRRNIPAFVFPGSIRPSRSTKSSGESRRSLEMKNSGHAIPNLSSEGKSGIDKLDDTRKRKRENDDTFSSLKVTGCSASVASSSGGVHVGSPVSTATSLMKADTETNGSGETKGNTGAEITHVKSGELNVSGQQSPPVNTSLAPASSSTSKEAEKLAIEKIMSGPYAAHQAVPELDELDYNLEDVNQVQHFGSGNKQIEDGSAVKASEEVAVPDTIVSHSASYSSGALEELEVVFFSCTALLRLYMIVNVQFNLDILHTIFFFTFVLKQAHFRVDPYIHLKLKCL*

Click here to download the sequence:
Link to NCBI Protein BLAST