Transcript Information: R_Transcript_92165.p1


Annotated TAIR IDAT3G02490.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:513607-515604 | Forward length=665
E-Value2.9E-195
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.945029669676
Replicate 217.502116691743
Replicate 320.796458649701
Condition 2: 8 Hour
Replicate 115.790290322592
Replicate 215.748971757388
Replicate 322.251231444011
Condition 3: 24 Hour
Replicate 129.473321611792
Replicate 229.461631118319
Replicate 331.351779076031


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_92165.p1 GENE.R_Transcript_92165~~R_Transcript_92165.p1 ORF type:complete len:673 (+),score=138.82,PPR_2|PF13041.2|0.042,PPR_2|PF13041.2|0.16,PPR_2|PF13041.2|55,PPR_2|PF13041.2|2,PPR_2|PF13041.2|0.25,PPR_2|PF13041.2|0.0009,PPR_2|PF13041.2|3.8,PPR_2|PF13041.2|89,PPR_2|PF13041.2|1.2e+03,PPR|PF01535.16|0.084,PPR|PF01535.16|0.83,PPR|PF01535.16|5.2e+02,PPR|PF01535.16|2.7,PPR|PF01535.16|6.6e+03,PPR|PF01535.16|0.0036,PPR|PF01535.16|1.2,PPR|PF01535.16|12,PPR|PF01535.16|1.2e+02,PPR|PF01535.16|47,PPR|PF01535.16|1.4e+04,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|9.2,PPR_3|PF13812.2|9.2,PPR_3|PF13812.2|54,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|4.9e+03,PPR_3|PF13812.2|38,PPR_3|PF13812.2|3.2 R_Transcript_92165:104-2020(+)
ATGAGAAATCAATGGCGTCTTCTCCTTCGCCACCACCAAAGGCACCCACTTTCATCGCCTTCCAACTTTTCAAGACCCATTTCGTTCCACTCTAACCAGGTAAAAACCTTCGCTTTATCATCCCATGTTATTCCAAGAAACCCAACTTTTAACCCTCTTTTACTTCGTTATTTCTCTTCTGACACTCCTATTGAAGAAAAACCATCTGGGCATACTCTATTACTTGATATCTTCTCTAAACCACTAACTAATGACAAGATTATGCAACAAATTGAATCTAACAATGTTGTTATTACCCATGATTTGGTCTTAAGTGTGCTTAAAGATCTGGGGTCTAATCCCAGTACTGGTATTAAGTTCTTTGATTGGGTTTTGGAGAGGGAGAGTGAGAGATTGAGCTCAAAGTCATATAATTTGATGTTAAAAATTCTGGGTAATAATGGGTTTGTTAAGGAGTTTTGGGATATGGTTGGTGTTATGAAGAAAAACGGATATGGGGTTTCAAAGGGGACTTTTATTGAGGTCTCAAACAAGTTCGAAAAGGACGGATTGCGTGGCGATTTGGAGAAGTTGAAGGGGTTGTTTGAGAAGGATGTTGATGGGGATTGTACCAGGGTGAGCAAGATTGTTAGCAAAAATGTTTGGGATGATGGTGTTGAGAAGGAGTTAAGGGAATTGGGTTTTACTTATTCTAGTGAATTGGTTAAGATGGTGTTGGAGAAGCTTAGTAAAGATCCTTTGAAGGGTTTGATCTTTTTTAGGTGGGTTGAGGAGAGCGGTGTTTTTAAACATGATAAGCGAAGTTATAATGCTATGTTGTTGGTTTTGGGTAGGGAGGATTGTATTGATAGGTTTTGGAATGTTGTTGGTGAAATGAAAGATGCAGGACATGAGATGGAGGTGGACACTTTTATTGAGGTTTTGGGTAGATTTATAAAGAGGAAGATGTTGAAGGAGGCAGTTAGGCTGTATGAGTTTTTGATGAATGGGGTGAACAAGCCTTCTAGGCAAGATTGTACTTTACTTTTAAGGAAAATAGTCGTTGCGAAGGATCTTGACATGGAGTTGTTTTGTAGAGTTGTTAAGGCGTTTACGGAGAAGGGTTTTGCCTTGGATGACTCTATGCTGGATGCTGTTCTCAAATCGTTGACTAGCGTTGGTAGGATGAAGGAGTGTAATAAGGTCTTGGAAGTTATGCTCGAAAGTGGGTACAGACCTAGTGGGGCTATGCAAGCTAGGTTTGCATTTGATCTAAGTAGTTCTAGAATGAAAAATGAAGCAGATGAGTTTATTCAGAAATTAGAGGCTTCTGGCTTAACCCCAGATTACAAGACATGGGGGTGTTTGATCGAAGGATACTGTGTAGCTGGTGATCTTAAGAAAGCCAGTAACTGCTTGCAAAAGCTGGCTGAAAGTGATGGTTTCTCATCGGCTGGATATTCGTTGGATATGTTGGTCAATGCTTACTGCACTAGAGATCGACCTCTCGAAGCATGCAAGATTCTCTCTGATCTTGTCAGCAGAGGGGATCTAAAGCCATGGCATACGACTTATAAGGTGCTTATTAGCAAGCTTCTTGTTCAAAAATGTTTCAAAGATGCCTTGGGCCTGCTTGGTCCGATGAAGGATCATGGGTTTCCTCCTTTCTTGGATCCATTCATTGCATATCTTTCAAGGAGAGGAACAGCTGATGAGGCCATGCTGTTTTTCAAGGCAATGACTGTGAAAAGCTTTCCGTCTACTAGTGTTTTTCTTCGGGTTTTTGAAGCCTTCTCAAAGGCTGGAAGACCCAATGAAGCTCAGAACTTACTGGCTAAATGCCCGCAATACATCAGAAATCATGCAGATGTTCTGAATTACTTTTATTCCATGAAGTCTGAAAAATCTGTTGAACCAGCTGCTGCTGTATCTGCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_92165.p1 GENE.R_Transcript_92165~~R_Transcript_92165.p1 ORF type:complete len:673 (+),score=138.82,PPR_2|PF13041.2|0.042,PPR_2|PF13041.2|0.16,PPR_2|PF13041.2|55,PPR_2|PF13041.2|2,PPR_2|PF13041.2|0.25,PPR_2|PF13041.2|0.0009,PPR_2|PF13041.2|3.8,PPR_2|PF13041.2|89,PPR_2|PF13041.2|1.2e+03,PPR|PF01535.16|0.084,PPR|PF01535.16|0.83,PPR|PF01535.16|5.2e+02,PPR|PF01535.16|2.7,PPR|PF01535.16|6.6e+03,PPR|PF01535.16|0.0036,PPR|PF01535.16|1.2,PPR|PF01535.16|12,PPR|PF01535.16|1.2e+02,PPR|PF01535.16|47,PPR|PF01535.16|1.4e+04,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|9.2,PPR_3|PF13812.2|9.2,PPR_3|PF13812.2|54,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|4.9e+03,PPR_3|PF13812.2|38,PPR_3|PF13812.2|3.2 R_Transcript_92165:104-2020(+)
MRNQWRLLLRHHQRHPLSSPSNFSRPISFHSNQVKTFALSSHVIPRNPTFNPLLLRYFSSDTPIEEKPSGHTLLLDIFSKPLTNDKIMQQIESNNVVITHDLVLSVLKDLGSNPSTGIKFFDWVLERESERLSSKSYNLMLKILGNNGFVKEFWDMVGVMKKNGYGVSKGTFIEVSNKFEKDGLRGDLEKLKGLFEKDVDGDCTRVSKIVSKNVWDDGVEKELRELGFTYSSELVKMVLEKLSKDPLKGLIFFRWVEESGVFKHDKRSYNAMLLVLGREDCIDRFWNVVGEMKDAGHEMEVDTFIEVLGRFIKRKMLKEAVRLYEFLMNGVNKPSRQDCTLLLRKIVVAKDLDMELFCRVVKAFTEKGFALDDSMLDAVLKSLTSVGRMKECNKVLEVMLESGYRPSGAMQARFAFDLSSSRMKNEADEFIQKLEASGLTPDYKTWGCLIEGYCVAGDLKKASNCLQKLAESDGFSSAGYSLDMLVNAYCTRDRPLEACKILSDLVSRGDLKPWHTTYKVLISKLLVQKCFKDALGLLGPMKDHGFPPFLDPFIAYLSRRGTADEAMLFFKAMTVKSFPSTSVFLRVFEAFSKAGRPNEAQNLLAKCPQYIRNHADVLNYFYSMKSEKSVEPAAAVSA*

Click here to download the sequence:
Link to NCBI Protein BLAST