Transcript Information: R_Transcript_92213.p1


Annotated TAIR IDAT3G24060.1
Annotated Gene NamePlant self-incompatibility protein S1 family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:8689589-8690032 | Reverse length=147
E-Value3.6E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.87761553074
Replicate 221.527852325571
Replicate 321.16698537366
Condition 2: 8 Hour
Replicate 115.807330535563
Replicate 212.029588332283
Replicate 316.428356447565
Condition 3: 24 Hour
Replicate 114.966165471225
Replicate 219.682224706148
Replicate 315.930924297425


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_92213.p1 GENE.R_Transcript_92213~~R_Transcript_92213.p1 ORF type:complete len:158 (+),score=19.69,Self-incomp_S1|PF05938.7|6.9e-18 R_Transcript_92213:119-592(+)
ATGACCAAGAACAATTTCACCATGGTATTCTCTTGTGTACTAAGTCTCCTAGCAATATGCATGATTTTGACAAGCATCATGAAGCAACCGGAGTACTACTTGTACAAGACGGTGTATGAGGTTCGGGTGATGAACGGTTTCTCCGACAACTCGTCGATGCCACTCGTGATATGGTGCGCATCGCCGGAGAATGACATGGGAGGAAGAGCTTTGCAAGAAGGTGATGACTATAGTTGGAGCCTTGTGGCTAACTTTTGGACTTCTTGGGGTAGTAAAGTTATTGGTGGTTATTATAACCGGGTGTTTTGCACGGTGAAATGGGACCAAAAGAGGAAGAAATTTGATGCTTTTCATGTGTATAGAGATAGCCGACGTTGTAGCCCCTCCAACAAGTGCCTTTGGCTTGTCAAGGAGGATGGTTTCTATTTTAGCAATGATGGGTTAGTTTTTCACAAGGATTTCTCATGGACTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_92213.p1 GENE.R_Transcript_92213~~R_Transcript_92213.p1 ORF type:complete len:158 (+),score=19.69,Self-incomp_S1|PF05938.7|6.9e-18 R_Transcript_92213:119-592(+)
MTKNNFTMVFSCVLSLLAICMILTSIMKQPEYYLYKTVYEVRVMNGFSDNSSMPLVIWCASPENDMGGRALQEGDDYSWSLVANFWTSWGSKVIGGYYNRVFCTVKWDQKRKKFDAFHVYRDSRRCSPSNKCLWLVKEDGFYFSNDGLVFHKDFSWT*

Click here to download the sequence:
Link to NCBI Protein BLAST