Transcript Information: R_Transcript_92234.p1


Annotated TAIR IDAT5G27680.1
Annotated Gene NameRECQ helicase SIM
Annotated Gene Symbol(s)RECQSIM
Annotation TypeHomolog
Chromosome Positionchr5:9794244-9798637 | Reverse length=858
E-Value5E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0809706149157
Replicate 20.2486871453707
Replicate 30.50387070854481
Condition 2: 8 Hour
Replicate 10.4971749227867
Replicate 20.68104208653357
Replicate 30.98282832462332
Condition 3: 24 Hour
Replicate 11.0876795302466
Replicate 20.63441523035502
Replicate 31.1851210659572


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_92234.p1 GENE.R_Transcript_92234~~R_Transcript_92234.p1 ORF type:complete len:591 (+),score=120.18,DEAD|PF00270.25|5.2e-17 R_Transcript_92234:246-2018(+)
ATGGATGGGAATCCAGAGTCTACTGACCAAGTTGTTGCAAAGCTTCTTGACATGGGCTTTGAAAGTTCTCAAGTCATGGAAGCTATAGAGGCAGTGGGTCCATTATTAAATGATGCAGTGGATCACATACTGAATCAATCTTCAAGGAAAAGCAACGATGCATCAACTAGTTGTAATTGTTTTGCTGCCGTTAACATGCCTAAAAAGGCCAAATCTTTGGGCAAGAGTTCCTTCTCCACACCTCGTCCGCTTGGTCAGATGAGACAGTCTAGCATAATGGATCATCTTCAACCTGTAAGCAGGCTAAGGAAGAGCCGGTCCAGCAACAGTTATGAGGTAATAACTTCCAAAACAGAGAAGCTAAACGGGCATTTAGGGGCACAGATAGAAGTAGATAAACCTTGTACTGAAGAGATATTTCATCCTAACGACACTTTTAAGTCTACTCCTCTATCATGGGTCATAAATCCTCTACTAAGAGAAGAACATGATGTGGAAATCGGACCGGACTGGGAGCAGAAGGCAAACAAGCTATTGCGAAAACATTTTGGGTATTCAAAATTGAAAAAATTTCAAAAAGAGGCTCTTAGTGCTTGGTTAGCCCATCAAGATTGTCTTGTTCTCGCAGCAACTGGGTCCGGAAAATCTATATGTTTTCAGCTCCCTGCACTTTTGACAGGGAAGGTCGTGATTGTCATTTCTCCATTGATAAGCTTGATGCATGACCAGTGCTTAAAGCTAGCAAAACATGGAGTCTCTGCATGCTTTCTTGGATCTGGACAACCTGACAGTAGTGTTGAAACGAAAGCAATGAAGGGGATGTATTCCATCATATATGTTTGTCCTGAGACAGTGTTAAGACTAATAAAGCCTCTTCAGAGGCTTGCTGAGAACCGTGGAATTGCTTTATTTGCCATTGATGAAGTACATTGTGTTTCAAAGTGGGGTCATGACTTTAGACCAGACTACAGGCGATTGTCTGTGTTGCGAGAGAATTTCAGTGTCAACAGTTTGCAGTCCTTGAAAATAGATATACCAATAATGGCATTGACCGCCACTGCCACCAACTGTGTCAGAGAAGACATCCTCAAGGCACTTCACATGTCAACTGAAGCCAAAGTTGTTCTCACAACATTCTTTCGGCCAAATCTTCATTTTTCAGTGAAGCATAGTAGAACATCTTCTCCATCTTCCTATGCTAAAGATCTCCATGAACTGGTTCAAGTATACTCTAGCAAGAAAAAAACCAGCGAAAGGTCCTTTGTCCGGACAGAGGATCTTCAGAATGCATCAGGCCACTCAACCAGTTCAAGTACTGATGGTAGTGATAGTGATAGTGATAGCGATAGCATGGAGGAGAATGATTTTGGTGGAGAGGATGATGAGGTCAACTCATGGAAGAAAAATGGCTTCAGTGCTCCAAAAGAGAGACAGTTATCAGTTGAATATCTGGAAGATGATTTTGATGACATTCAGACAGCAGATGACTTTGATGTTTCATGTGGTGAGTTTCTTGGACAAGTACCGGCCAATGAGCAGAAGGTTAATGGGTACTGTGAATTGCCAGATTTCCCTTCAAAGTCAGCAGGACCACAAATTATGCATGGTCCTTTGGAACAAGGGTCAACCATCATATATGTTCCTACCAGAAAAGAGACGCTAAGTATAGCAAAATTTCTCTGTGCAAAGGGCGTGAAGGCTGCTGCCTATAATGCAGCGGTAATTTTGTATTTTTCTTTGCTTTGGTTGGCTGAAGTATGTGCAGTTTGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_92234.p1 GENE.R_Transcript_92234~~R_Transcript_92234.p1 ORF type:complete len:591 (+),score=120.18,DEAD|PF00270.25|5.2e-17 R_Transcript_92234:246-2018(+)
MDGNPESTDQVVAKLLDMGFESSQVMEAIEAVGPLLNDAVDHILNQSSRKSNDASTSCNCFAAVNMPKKAKSLGKSSFSTPRPLGQMRQSSIMDHLQPVSRLRKSRSSNSYEVITSKTEKLNGHLGAQIEVDKPCTEEIFHPNDTFKSTPLSWVINPLLREEHDVEIGPDWEQKANKLLRKHFGYSKLKKFQKEALSAWLAHQDCLVLAATGSGKSICFQLPALLTGKVVIVISPLISLMHDQCLKLAKHGVSACFLGSGQPDSSVETKAMKGMYSIIYVCPETVLRLIKPLQRLAENRGIALFAIDEVHCVSKWGHDFRPDYRRLSVLRENFSVNSLQSLKIDIPIMALTATATNCVREDILKALHMSTEAKVVLTTFFRPNLHFSVKHSRTSSPSSYAKDLHELVQVYSSKKKTSERSFVRTEDLQNASGHSTSSSTDGSDSDSDSDSMEENDFGGEDDEVNSWKKNGFSAPKERQLSVEYLEDDFDDIQTADDFDVSCGEFLGQVPANEQKVNGYCELPDFPSKSAGPQIMHGPLEQGSTIIYVPTRKETLSIAKFLCAKGVKAAAYNAAVILYFSLLWLAEVCAVC*

Click here to download the sequence:
Link to NCBI Protein BLAST