Transcript Information: R_Transcript_92421.p1


Annotated TAIR IDAT1G43722.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16496403-16497377 | Forward length=324
E-Value5E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27406848280358
Replicate 20.44136367241467
Replicate 30.82546802148297
Condition 2: 8 Hour
Replicate 10.29412450387081
Replicate 20.60434815786988
Replicate 30.81764011803545
Condition 3: 24 Hour
Replicate 10.55153891237728
Replicate 20.72855209548454
Replicate 30.13145768580719


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_92421.p1 GENE.R_Transcript_92421~~R_Transcript_92421.p1 ORF type:complete len:333 (-),score=41.77,DDE_Tnp_4|PF13359.2|7.7e+03,DDE_Tnp_4|PF13359.2|2.5e-10 R_Transcript_92421:3254-4252(-)
ATGGGAGAAGACGGAACTGAGATTGAAATTATACAAGAGGATGACAGAAGTAATGAAGAGACAAGTAATGAATTAGAGGAGGATGAATCAAAGAATGAAGGGACTTGTGATGAAATGGAGGAGGATGAAAGCGGTGAAGAAGAGTTACTACTTCAAAAACGACAAGAAACGGGGAAGCTACTTTCACTCGTTGCTACAGGGGTAGTGATTTGTGCTCAATATCACATGAAGTACCTAATGAAACAACAGGTTAGAACTTCTGTTTGCTCTGGTTGGCAGTTTCTAAAGGAAGTTCTGAACACACATGGTGAATGTTATCGAATGCTTAGAATGGAACCACAAGTATTTCTTAAATTGGCTGATATATTAGTGACTAATTATGGTTTACAATCAACTAGGGCCATGCATGCACGCGAGGCATTAGCTATGTTTTTATGGGTTTGTGCACATGGACACTCAAATCGTAATGTCCAGTCTAGATTTAAACATTCGGGAGAAACTGTTAGTAGAAAATTTGATGAGGTTTTGAAGTCTTTGGTTGCTTTTTCTAGAGATATTATACAACCACCTGATAGACAGTTTAGAGATGTTCCAAGCAAGATACGTAAAAATTATAAATATTGGCCACATTTTAGAGGGTGTATTGGGGCTATTGACGGTACTCATGTTCGTGTTGTGATAATTCCTAAGGAGGATGAAGTTACATACATTGGTAGAAAGACTTACCCAATGCAAAATGTGATGGCAATTTGTAACTTTGATATGTTGTTCACCTTTGTTCAAACTGGCTGGGAGGGTTCTGCTCATGACACACGTATTCTTACCACTACATTGGAAAAGTTTAAAGGCAAGGACATATTTCCATATGCTCCTGAAGGTATGTACTATACAACCCTTAATTGTTTTTATTCAACTAGTTTCTACTTCCAATCCTGTTTTTTATTCTGTTTTTTTTTTCTCTCTTTTTTGCGTTTGAAGTTGGCAATCATATTCTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_92421.p1 GENE.R_Transcript_92421~~R_Transcript_92421.p1 ORF type:complete len:333 (-),score=41.77,DDE_Tnp_4|PF13359.2|7.7e+03,DDE_Tnp_4|PF13359.2|2.5e-10 R_Transcript_92421:3254-4252(-)
MGEDGTEIEIIQEDDRSNEETSNELEEDESKNEGTCDEMEEDESGEEELLLQKRQETGKLLSLVATGVVICAQYHMKYLMKQQVRTSVCSGWQFLKEVLNTHGECYRMLRMEPQVFLKLADILVTNYGLQSTRAMHAREALAMFLWVCAHGHSNRNVQSRFKHSGETVSRKFDEVLKSLVAFSRDIIQPPDRQFRDVPSKIRKNYKYWPHFRGCIGAIDGTHVRVVIIPKEDEVTYIGRKTYPMQNVMAICNFDMLFTFVQTGWEGSAHDTRILTTTLEKFKGKDIFPYAPEGMYYTTLNCFYSTSFYFQSCFLFCFFFLSFLRLKLAIIFL*

Click here to download the sequence:
Link to NCBI Protein BLAST