Transcript Information: R_Transcript_92421.p2


Annotated TAIR IDAT5G05800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1743234-1744751 | Reverse length=449
E-Value7E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8128407327635
Replicate 22.1462884869994
Replicate 33.3596548474357
Condition 2: 8 Hour
Replicate 11.9588691957796
Replicate 23.7765044887336
Replicate 32.5815623993439
Condition 3: 24 Hour
Replicate 13.8773185540123
Replicate 22.3525609483282
Replicate 32.5292458749304


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_92421.p2 GENE.R_Transcript_92421~~R_Transcript_92421.p2 ORF type:complete len:225 (-),score=55.77 R_Transcript_92421:4539-5213(-)
ATGTTGTCTTTATCAAGCTATTTTACTAATATTTCTTTATTTCTCATGCAGGCTGATCCTGAAATCGCTAAGTTTCGTGAAGGTGGAATAGAAAATTTGACAGAGATGGAAATAATGTTTGACAAGAATTTTGCAACTGGTGATAAACAATGGGATCCATATACTTCAATGGATGATGTATTGGATGAAGCTGAGTTTGAAACTGGTAGTGACAATTACAATACGGGTGATAATGCTTTGGACAATACTCAAGATGTGTCTTTTGGAGAGGAAGGTGAATGTAGAGATAATCTTGGTAAGAAGAAAAAGCCATACCTTAATGATGAAGGGAAGGCAAAGAAGTCTAAAGCAAGTAAAAAATCAAAAGTAGGGACTGCCATGCAAATGCAAAATCAACTCAATCGGATTTGTGATGCTGTTGAGAGCTACACTTCTCAGTCTACTGTGTCTTCTAGACTGAGTGATCTACCTGGATGTAGCATTGGAGAATGCATGGCCCTACTGAAAACACTTCCAAAAGCTGGGCTTGGGAGTGAATTGTTTATGTTTGCTGCTCGTTTGTTCATAAAAAAAGAGTACAGAGAGATGTTTATAGCATTGGAGGATAATGGTATAAGAGAAACTTGGCTAGAACAAGAGTACAAGTTTGACAAGAGTCGTTCTACTCATCGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_92421.p2 GENE.R_Transcript_92421~~R_Transcript_92421.p2 ORF type:complete len:225 (-),score=55.77 R_Transcript_92421:4539-5213(-)
MLSLSSYFTNISLFLMQADPEIAKFREGGIENLTEMEIMFDKNFATGDKQWDPYTSMDDVLDEAEFETGSDNYNTGDNALDNTQDVSFGEEGECRDNLGKKKKPYLNDEGKAKKSKASKKSKVGTAMQMQNQLNRICDAVESYTSQSTVSSRLSDLPGCSIGECMALLKTLPKAGLGSELFMFAARLFIKKEYREMFIALEDNGIRETWLEQEYKFDKSRSTHR*

Click here to download the sequence:
Link to NCBI Protein BLAST