Transcript Information: R_Transcript_92424.p1


Annotated TAIR IDAT5G05800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1743234-1744751 | Reverse length=449
E-Value1E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2310314931206
Replicate 24.7369702158721
Replicate 35.3076587113036
Condition 2: 8 Hour
Replicate 14.4791216366912
Replicate 23.4086710123759
Replicate 33.2097360243367
Condition 3: 24 Hour
Replicate 15.1795052891771
Replicate 23.0931155761176
Replicate 33.7369251904459


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_92424.p1 GENE.R_Transcript_92424~~R_Transcript_92424.p1 ORF type:complete len:164 (-),score=30.07,Myb_DNA-bind_3|PF12776.3|9e-27 R_Transcript_92424:27-518(-)
ATGTATTGCGAGGTTTGTGCCGAGGAGGTACTTGCTGGAAATAGGCCACACACTCATTTTAATAGAATAGGTTGGGCGAATGTTGTTAGGAAGTTTCAAGAAAGGTCTGGGAGAAACTATTGCTACAATCAGCTAAAAAATAGGTGGGAAACTTTGAAGAAGCAGTACAAGGCATGGAAGAAACTTCAAGTGGAAACCGGCTTAGGGTGGGACCATGATAAAGGTACAATTGATGCTGATGAGTCGTGGTGGGCAGAGAAAGCTGAGGCTAATCCTGAAATCAGTAAGTTTCATGAAGGTGGAATACAAAATTTGACAGAGATGGAAATAATGTTTGACAAGAATTTTGCAACTGGTGATAAACAATGGGATCTATATACTTCAATAGATATGTACTGGATGAAGCTGAGATTGAAACTGGTAGTGACAATGACAATGTTGGTGATAATGCTTTGGATGATGCTCAGATTTGTCTTTTGGAGAGCAGGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_92424.p1 GENE.R_Transcript_92424~~R_Transcript_92424.p1 ORF type:complete len:164 (-),score=30.07,Myb_DNA-bind_3|PF12776.3|9e-27 R_Transcript_92424:27-518(-)
MYCEVCAEEVLAGNRPHTHFNRIGWANVVRKFQERSGRNYCYNQLKNRWETLKKQYKAWKKLQVETGLGWDHDKGTIDADESWWAEKAEANPEISKFHEGGIQNLTEMEIMFDKNFATGDKQWDLYTSIDMYWMKLRLKLVVTMTMLVIMLWMMLRFVFWRAG*

Click here to download the sequence:
Link to NCBI Protein BLAST