Transcript Information: R_Transcript_92473.p1


Annotated TAIR IDAT1G73400.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27598106-27599812 | Forward length=568
E-Value2.2E-213
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3648936716525
Replicate 21.8257652535911
Replicate 32.1114036392975
Condition 2: 8 Hour
Replicate 12.5976308900556
Replicate 22.1388669587221
Replicate 33.7250261794881
Condition 3: 24 Hour
Replicate 12.8347901098556
Replicate 22.4932031789348
Replicate 32.8168524292703


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_92473.p1 GENE.R_Transcript_92473~~R_Transcript_92473.p1 ORF type:complete len:575 (+),score=112.84,PPR_2|PF13041.2|12,PPR_2|PF13041.2|3.6e-07,PPR_2|PF13041.2|1.6e-08,PPR_2|PF13041.2|1.5e-13,PPR_2|PF13041.2|2.7e-10,PPR_2|PF13041.2|3e-13,PPR_2|PF13041.2|8.6e-15,PPR_2|PF13041.2|9.3e-13,PPR_1|PF12854.3|12,PPR_1|PF12854.3|2.9e-05,PPR_1|PF12854.3|2.1e-11,PPR_1|PF12854.3|16,PPR_1|PF12854.3|1.9e-10,PPR_1|PF12854.3|1.9e-07,PPR_1|PF12854.3|2.5e-05,PPR_1|PF12854.3|0.3,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|0.76,PPR|PF01535.16|0.016,PPR|PF01535.16|4.4e-09,PPR|PF01535.16|0.0018,PPR|PF01535.16|0.0032,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|9.4e-05,PPR|PF01535.16|0.88,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|71,PPR_3|PF13812.2|0.37,PPR_3|PF13812.2|0.00034,PPR_3|PF13812.2|0.002,PPR_3|PF13812.2|8.1,PPR_3|PF13812.2|0.0042,PPR_3|PF13812.2|3.7e-05,PPR_3|PF13812.2|5.4e+02,PPR_3|PF13812.2|1.8e+03 R_Transcript_92473:270-1994(+)
ATGTGGCAATCTTCTATCATTTCAATTCTCAAGCAGTACAGGCATTCATTTAAGCGCCATAATCTTTTCCCACCGTTTATATATCCGCCATCTGGAGCTTTGCTTCATTATTTCCACAAGATTCAAACTCCTTATGCTGGTGAATTTCACCTTCCCTTGAAAGAGTGCTTTATGCTTGGCTTCCCTTCAAGAAAATTTTTGTCCAGCCTAGCTTCAAATGATTTTATGGATGAGGATTCAAGTAGAAATGGTGCCAAGGAAGAAACATCTATATGTGCCGCAAATGCGATATATAAAATTGTTATGGATAATGGGGGCTGTGATAAAAACATGGAGAAAGCTCTTGAGCAGTCAGGGATCCCCCTAAGTACCGACTTGGTCATCGGACTCCTCCATAAGCTGCGTTTTGAGGAGAAAATAGCATTTAGGTTTTTCATGTGGGCTGGCCACCAGGAGCAATATGACCATGAATACGAGGCTTATAATGAGATGATCGATGTATTATCTAGTACAAAATTCAAACTTAAGCAATTCAAAATTGTTTGTGATATGTTAGAATACATGAAAAGGAATAAGAAAAAGTCGGTCCCTGTTGTTGTTCTCTTGAATATCTTGAAAAAATATACAGAAAAACATCTGACTGAGATGAAGAAATGCTCGAAGAAGAAGAAAAGAATTAGGATAAAAATTCAACCAGAGGTCAATGCACTCAACTTGCTACTTGAAGCTCTTTGCAAGTGTTGTCTGGTTGAGACTGCAGAAATATTGTTTAAGAAGGTGAAGAACAAGGTTGAGCCAGATGTGAATACCTTCAACATATTACTTTTTGGGTGGTGTAGGATCAGAAACCCAAGTAGAGGAATGAATATCCTGGAAGAAATGTCCAGTATGGGCTTTACTCCAGATAGTTTTACGTACAATGCTGCAATCAGCAGCTTTTGTAAAGCAGGACTGGTGAATGAGGCTTATGAGCTTTTCAAGCTCATGAGAGCAAAAGGTTGTATCTCATCTTCTCCCACTGCAAAAACATATGCGATAATGATTTTGGCTTTTGTTGAGAATGATAGAATGGAGGATTGCTTTAAAGTTGTTGGGGATATGGTAGAAAGTGGTTGTCTTCCTGATGTTTGCACTTATAAGGAGTTACTTGAAGGAATGTGCTTGGCCGGAAAAGTGGAGGAAGCTTACAGGTTTTTGGAGGAGATGGCAAAGAGAGACTTCCCCCCTGATATTGTCACATACAACTGTTTTCTTAAGGTTCTTTGTGACAATAAGATGGTTAGTGAAGCAATTCGGCTTTATGAGAAAATGATTGAGTTAGGTTGTATGCCTAGTGTGCATACTTTTAATATGCTGATTGAGATGTTCTTTGCCATGGGTGACCCCGATGGAGCATTTGAGACTTGGGATGAAATGGATAAGAAAGGTTGTTATCGTGATACCAATACTTATTGTGTGATGATTGAAGGTCTTTTTGGTTGTGACAAAATAGAGGATGCGTGTTTTCTTTTGGAAGATGTTGTGAGCAAGGGAATGAAACTACCCTACAAAAAATTTGATTTATTTCTGACGCACCTGTCAACTATTGGCAATCTCCGTGCAATTCACAGTCTTTCAGAGCACATGAGAAGGTTCTACAATCCTGGCATGGCAAGACGCTTTGCACTGAGTCAAAAGAGAGAGCATGAGCTTGAGGGAGAACTAAACTGTGGCAAATTTTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_92473.p1 GENE.R_Transcript_92473~~R_Transcript_92473.p1 ORF type:complete len:575 (+),score=112.84,PPR_2|PF13041.2|12,PPR_2|PF13041.2|3.6e-07,PPR_2|PF13041.2|1.6e-08,PPR_2|PF13041.2|1.5e-13,PPR_2|PF13041.2|2.7e-10,PPR_2|PF13041.2|3e-13,PPR_2|PF13041.2|8.6e-15,PPR_2|PF13041.2|9.3e-13,PPR_1|PF12854.3|12,PPR_1|PF12854.3|2.9e-05,PPR_1|PF12854.3|2.1e-11,PPR_1|PF12854.3|16,PPR_1|PF12854.3|1.9e-10,PPR_1|PF12854.3|1.9e-07,PPR_1|PF12854.3|2.5e-05,PPR_1|PF12854.3|0.3,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|0.76,PPR|PF01535.16|0.016,PPR|PF01535.16|4.4e-09,PPR|PF01535.16|0.0018,PPR|PF01535.16|0.0032,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|9.4e-05,PPR|PF01535.16|0.88,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|71,PPR_3|PF13812.2|0.37,PPR_3|PF13812.2|0.00034,PPR_3|PF13812.2|0.002,PPR_3|PF13812.2|8.1,PPR_3|PF13812.2|0.0042,PPR_3|PF13812.2|3.7e-05,PPR_3|PF13812.2|5.4e+02,PPR_3|PF13812.2|1.8e+03 R_Transcript_92473:270-1994(+)
MWQSSIISILKQYRHSFKRHNLFPPFIYPPSGALLHYFHKIQTPYAGEFHLPLKECFMLGFPSRKFLSSLASNDFMDEDSSRNGAKEETSICAANAIYKIVMDNGGCDKNMEKALEQSGIPLSTDLVIGLLHKLRFEEKIAFRFFMWAGHQEQYDHEYEAYNEMIDVLSSTKFKLKQFKIVCDMLEYMKRNKKKSVPVVVLLNILKKYTEKHLTEMKKCSKKKKRIRIKIQPEVNALNLLLEALCKCCLVETAEILFKKVKNKVEPDVNTFNILLFGWCRIRNPSRGMNILEEMSSMGFTPDSFTYNAAISSFCKAGLVNEAYELFKLMRAKGCISSSPTAKTYAIMILAFVENDRMEDCFKVVGDMVESGCLPDVCTYKELLEGMCLAGKVEEAYRFLEEMAKRDFPPDIVTYNCFLKVLCDNKMVSEAIRLYEKMIELGCMPSVHTFNMLIEMFFAMGDPDGAFETWDEMDKKGCYRDTNTYCVMIEGLFGCDKIEDACFLLEDVVSKGMKLPYKKFDLFLTHLSTIGNLRAIHSLSEHMRRFYNPGMARRFALSQKREHELEGELNCGKFC*

Click here to download the sequence:
Link to NCBI Protein BLAST