Transcript Information: R_Transcript_92584.p1


Annotated TAIR IDAT4G14210.1
Annotated Gene Namephytoene desaturase 3
Annotated Gene Symbol(s)PDS3, PDS, PDE226
Annotation TypeOrtholog
Chromosome Positionchr4:8190426-8194769 | Reverse length=566
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.865845777883
Replicate 210.792835126273
Replicate 313.985166111335
Condition 2: 8 Hour
Replicate 111.985186526809
Replicate 213.063462549324
Replicate 316.495674212913
Condition 3: 24 Hour
Replicate 115.264927963684
Replicate 211.608030995041
Replicate 314.898998979853


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_92584.p1 GENE.R_Transcript_92584~~R_Transcript_92584.p1 ORF type:complete len:570 (+),score=127.71,Amino_oxidase|PF01593.20|5.8e-84,NAD_binding_8|PF13450.2|9.2e-14,DAO|PF01266.20|0.00027,DAO|PF01266.20|0.058,Pyr_redox_2|PF07992.10|0.0037,Pyr_redox_2|PF07992.10|1.2,Pyr_redox_2|PF07992.10|7.4e+02 R_Transcript_92584:227-1936(+)
ATGAGCCATTTGGGATGTGCTTGTTCTACACTATCCACATCAAGACATGTTCTCTTGCACAATTCAAGCTACCCCAGTTCAATTTCATTTCGTGGCAGTGATTTTTTGGGTTCTTCTGTAAGAAATTTCACTACCCGCCAGGTTTTTGGTACAAAGCAAAGAATTGGGCACCAGCCATTAAAGGTGGTTTGTGTGGATTACCCACGGCCAGAGCTTGATAGTACAGTGAACTTTCTAGAAGCTGCTTACTTATCTTCTACTTTTAGAACTTCTCCTCGTCCTGACAAGCCATTGGAGATTGTAATAGCTGGGGCAGGTTTGGCTGGTCTATCCACTGCCAAGTATTTAGCTGACGCAGGTCACAGACCCATATTGTTGGAAGCACGAGATGTTCTTGGTGGGAAGGTAGCAGCATGGAAAGATGAAGATGGAGACTGGTATGAAACAGGGCTACATATATTTTTTGGGGCTTACCCAAATATACAGAATTTATTTGGAGAGCTTGGTATAAATGACCGGTTGCAGTGGAAGGAGCACTCTATGATTTTTGCAATGCCAAATAAGCCCGGTGAATTCAGTCGCTTTGATTTCCCTGAAAACCTGCCTGCACCACTAAATGGCATATGGGCCATCTTAAGGAATAATGAAATGCTGACTTGGCCAGAGAAAGTGAAATTCGCTATTGGCCTATTGCCTGCTATGCTTGGTGGACAACCTTATGTTGAGGCACAAGATGGTTTGAGTGTCCAGGAGTGGATGAGGAAGCAAGGTATACCTGATCGTGTAACTGATGAAGTATTTATTGCCATGTCGAAGGCGTTGAACTTCATCAATCCTGATGAACTTTCAATGCAGTGCATTTTGATTGCTTTGAACCGCTTTCTGCAGGAGAAGCATGGTTCTAAGATGGCTTTCTTAGATGGTAATCCTCCAGAGAGGTTGTGCATGCCTATTGTTGAACATATTCAGTCACTCGGTGGTGATGTGCAACTTAATTCTCGTGTGCAAAAGATTGAGTTGAATGAGGATGGAGGTGTCAAGAGTTTCTTGTTAACTAATGGGGAAGTAGTAACAGCAGATGCTTATGTCTTTGCAGCCCCAGTGGACATTTTGAAGCTGCTTGTACCTGATGCTTGGAAAGAGATTACATACTTCAAAAAACTGGAGAAATTAGTAGGGGTTCCAGTCATTAATGTTCACATATGGTTTGATCGAAAATTGAAGAATACATATGACCATCTACTTTTCAGCAGGAGTCCTCTTTTGAGTGTTTATGCTGATATGTCAGTTACATGCAAGGAATACTATGATCCAAACCGGTCTATGCTAGAATTGGTCTTTGCACCTGCAGAGGAATGGATTTCTTGCAGTGACACTGAAATTATTGAGGCTACAATGGCAGAACTTGCCAAACTTTTCCCTGATGAAATTGCAGCTGATCAGAGCAAGGCCAAGGTCCTGAAGTATCATGTTGTAAAAACTCCAAGGTCTGTTTATAAGACTGTCCCAAACTGTGAACCTTGCCGTCCACTGCAAAGATCACCAGTGGAGGGTTTCTATTTGGCTGGTGATTACACAAAGCAAAAGTATTTGGCTTCGATGGAAGGCGCTGTTCTATCTGGGAAGCTTTGTGCACAATCAATTGTACAGGATTACGACAAGCTTGTTGCTCGAAAGCAAAGAGAATTGGCAGGGGCAAGTAACATCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_92584.p1 GENE.R_Transcript_92584~~R_Transcript_92584.p1 ORF type:complete len:570 (+),score=127.71,Amino_oxidase|PF01593.20|5.8e-84,NAD_binding_8|PF13450.2|9.2e-14,DAO|PF01266.20|0.00027,DAO|PF01266.20|0.058,Pyr_redox_2|PF07992.10|0.0037,Pyr_redox_2|PF07992.10|1.2,Pyr_redox_2|PF07992.10|7.4e+02 R_Transcript_92584:227-1936(+)
MSHLGCACSTLSTSRHVLLHNSSYPSSISFRGSDFLGSSVRNFTTRQVFGTKQRIGHQPLKVVCVDYPRPELDSTVNFLEAAYLSSTFRTSPRPDKPLEIVIAGAGLAGLSTAKYLADAGHRPILLEARDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPENLPAPLNGIWAILRNNEMLTWPEKVKFAIGLLPAMLGGQPYVEAQDGLSVQEWMRKQGIPDRVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVEHIQSLGGDVQLNSRVQKIELNEDGGVKSFLLTNGEVVTADAYVFAAPVDILKLLVPDAWKEITYFKKLEKLVGVPVINVHIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYDPNRSMLELVFAPAEEWISCSDTEIIEATMAELAKLFPDEIAADQSKAKVLKYHVVKTPRSVYKTVPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQSIVQDYDKLVARKQRELAGASNI*

Click here to download the sequence:
Link to NCBI Protein BLAST