Transcript Information: R_Transcript_92587.p1


Annotated TAIR IDAT4G14210.1
Annotated Gene Namephytoene desaturase 3
Annotated Gene Symbol(s)PDS3, PDS, PDE226
Annotation TypeOrtholog
Chromosome Positionchr4:8190426-8194769 | Reverse length=566
E-Value2.7E-235
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.37764746802866
Replicate 20
Replicate 30.47393250198936
Condition 2: 8 Hour
Replicate 10.16886803411893
Replicate 20.10280865214338
Replicate 30.50073408607964
Condition 3: 24 Hour
Replicate 10.4222125467164
Replicate 20.2535087228802
Replicate 30.30189937499169


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_92587.p1 GENE.R_Transcript_92587~~R_Transcript_92587.p1 ORF type:complete len:435 (+),score=84.82,Amino_oxidase|PF01593.20|8.5e-52,NAD_binding_8|PF13450.2|6.2e-14,DAO|PF01266.20|0.00018,DAO|PF01266.20|0.095,Pyr_redox_2|PF07992.10|0.0027,Pyr_redox_2|PF07992.10|0.82 R_Transcript_92587:227-1531(+)
ATGAGCCATTTGGGATGTGCTTGTTCTACACTATCCACATCAAGACATGTTCTCTTGCCCAATTCAAGCTACCCCAGTCCATTTTCATTTCGTGGCAGTGATTTTTTGGGTTCTTCTGTAAGAAATTTCACTACCCGCCAGGTTTTTGGTACAAAGCAAAGAATTGGGCACCAGCCATTAAAGGTGGTTTGTGTGGATTACCCACGGCCAGAGCTTGATAGTACAGTGAACTTTCTAGAAGCTGCTTACTTATCTTCTACTTTTAGAACTTCTCCTCGTCCTGACAAGCCATTGGAGATTGTAATAGCTGGGGCAGGTTTGGCTGGTCTATCCACTGCCAAGTATTTAGCTGACGCAGGTCACAGACCCATATTGTTGGAAGCACGAGATGTTCTTGGTGGGAAGGTAGCAGCATGGAAAGATGAAGATGGAGACTGGTATGAAACAGGGCTACATATATTTTTTGGGGCTTACCCAAATATACAGAATTTATTTGGAGAGCTTGGTATAAATGACCGGTTGCAGTGGAAGGAGCACTCTATGATTTTTGCAATGCCAAATAAGCCCGGTGAATTCAGTCGCTTTGATTTCCCTGAAAACCTGCCTGCACCACTAAATGGCATATGGGCCATCTTAAGGAATAATGAAATGCTGACTTGGCCAGAGAAAGTGAAATTCGCTATTGGCCTATTGCCTGCTATGCTTGGTGGACAACCTTATGTTGAGGCACAAGATGGTTTGAGTGTCCAGGAGTGGATGAGGAAGCAAGGTATACCTGATCGTGTAACTGATGAAGTATTTATTGCCATGTCGAAGGCGTTGAACTTCATCAATCCTGATGAACTTTCAATGCAGTGCATTTTGATTGCTTTGAACCGCTTTCTGCAGGAGAAGCATGGTTCTAAGATGGCTTTCTTAGATGGTAATCCTCCAGAGAGGTTGTGCATGCCTATTGTTGAACATATTCAGTCACTCGGTGGTGATGTGCAACTTAATTCTCGTGTGCAAAAGATTGAGTTGAATGAGGATGGAGGTGTCAAGAGTTTCTTGTTAACTAATGGGGAAGTAGTAACAGCAGATGCTTATGTCTTTGCAGCCCCAGTGGACATTTTGAAGCTGCTTGTACCTGATGCTTGGAAAGAGATTACATACTTCAAAAAACTGGAGAAATTAGTAGGGGTTCCAGTCATTAATGTTCACATATGGTTAGTATGTACACCTGCAATTTTTCGCGGGGAGGTTAGTTGTGTTGATGCACCTTATGTAGTATTCATGTTTGTTCTTGTCTCATTGTGTCTATGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_92587.p1 GENE.R_Transcript_92587~~R_Transcript_92587.p1 ORF type:complete len:435 (+),score=84.82,Amino_oxidase|PF01593.20|8.5e-52,NAD_binding_8|PF13450.2|6.2e-14,DAO|PF01266.20|0.00018,DAO|PF01266.20|0.095,Pyr_redox_2|PF07992.10|0.0027,Pyr_redox_2|PF07992.10|0.82 R_Transcript_92587:227-1531(+)
MSHLGCACSTLSTSRHVLLPNSSYPSPFSFRGSDFLGSSVRNFTTRQVFGTKQRIGHQPLKVVCVDYPRPELDSTVNFLEAAYLSSTFRTSPRPDKPLEIVIAGAGLAGLSTAKYLADAGHRPILLEARDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPENLPAPLNGIWAILRNNEMLTWPEKVKFAIGLLPAMLGGQPYVEAQDGLSVQEWMRKQGIPDRVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVEHIQSLGGDVQLNSRVQKIELNEDGGVKSFLLTNGEVVTADAYVFAAPVDILKLLVPDAWKEITYFKKLEKLVGVPVINVHIWLVCTPAIFRGEVSCVDAPYVVFMFVLVSLCLC*

Click here to download the sequence:
Link to NCBI Protein BLAST