Transcript Information: R_Transcript_92588.p1


Annotated TAIR IDAT4G14210.1
Annotated Gene Namephytoene desaturase 3
Annotated Gene Symbol(s)PDS3, PDS, PDE226
Annotation TypeOrtholog
Chromosome Positionchr4:8190426-8194769 | Reverse length=566
E-Value5.7E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0603766870187
Replicate 20.62863174899096
Replicate 31.5088270272915
Condition 2: 8 Hour
Replicate 10.87973167475132
Replicate 21.60676995266
Replicate 31.8477687457879
Condition 3: 24 Hour
Replicate 11.3747189956709
Replicate 21.5848090220774
Replicate 32.6212819984308


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_92588.p1 GENE.R_Transcript_92588~~R_Transcript_92588.p1 ORF type:complete len:167 (+),score=30.15,Amino_oxidase|PF01593.20|9.6e+02,Amino_oxidase|PF01593.20|2.4e-14,NAD_binding_8|PF13450.2|1e-11 R_Transcript_92588:227-727(+)
ATGAGCCATTTGGGATGTGCTTGTTCTACACTATCCACATCAAGACATGTTCTCTTGCCCAATTCAAGCTACCCCAGTCCATTTTCATTTCGTGGCAGTGATTTTTTGGGTTCTTCTGTAAGAAATTTCACTACCCGCCAGGTTTTTGGTACAAAGCAAAGAATTGGGCACCAGCCATTAAAGGTGGTTTGTGTGGATTACCCACGGCCAGAGCTTGATAGTACAGTGAACTTTCTAGAAGCTGCTTACTTATCTTCTACTTTTAGAACTTCTCCTCGTCCTGACAAGCCATTGGAGATTGTAATAGCTGGGGCAGGTTTGGCTGGTCTATCCACTGCCAAGTATTTAGCTGACGCAGGTCACAGACCCATATTGTTGGAAGCACGAGATGTTCTTGGTGGGAAGGTAGCAGCATGGAAAGATGAAGATGGAGACTGGTATGAAACAGGGCTACATATATTTTTGGAAGGAGCACTCTATGATTTTTGCAATGCCAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_92588.p1 GENE.R_Transcript_92588~~R_Transcript_92588.p1 ORF type:complete len:167 (+),score=30.15,Amino_oxidase|PF01593.20|9.6e+02,Amino_oxidase|PF01593.20|2.4e-14,NAD_binding_8|PF13450.2|1e-11 R_Transcript_92588:227-727(+)
MSHLGCACSTLSTSRHVLLPNSSYPSPFSFRGSDFLGSSVRNFTTRQVFGTKQRIGHQPLKVVCVDYPRPELDSTVNFLEAAYLSSTFRTSPRPDKPLEIVIAGAGLAGLSTAKYLADAGHRPILLEARDVLGGKVAAWKDEDGDWYETGLHIFLEGALYDFCNAK*

Click here to download the sequence:
Link to NCBI Protein BLAST