Transcript Information: R_Transcript_92656.p1


Annotated TAIR IDAT1G20823.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7238880-7239473 | Forward length=197
E-Value9E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4491314698737
Replicate 21.3288797731834
Replicate 31.9137274447418
Condition 2: 8 Hour
Replicate 10.99183250419221
Replicate 21.3020260312589
Replicate 30.64334822452004
Condition 3: 24 Hour
Replicate 10.58121030956213
Replicate 21.0050497722288
Replicate 30.72035483779662


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_92656.p1 GENE.R_Transcript_92656~~R_Transcript_92656.p1 ORF type:complete len:395 (+),score=18.90,zf-RING_2|PF13639.2|7e+03,zf-RING_2|PF13639.2|8.8e-14,zf-RING_11|PF17123.1|1.6e-11,zf-rbx1|PF12678.3|1.9e+03,zf-rbx1|PF12678.3|1.6e-09,zf-C3HC4|PF00097.21|2.7e+03,zf-C3HC4|PF00097.21|3.4e-07,zf-ANAPC11|PF12861.3|1.6e-05 R_Transcript_92656:36-1187(+)
ATGGCGTCTTTCCAAAGAAAACTCCTCCCAAAGGAGGCACAAGACACAAACACCACTACTTCTAGTACTACTACTACAACAGTGAAAACATGTCTCTTCTTTTGTAGCTCTCAATCAAACCAAACTAATCCCACCTTTGTCTGTCCTGAGGCCTGTTTGGCAATCTGTCCCTCTGTTTGCCACTATGCCTTGGAAGCCTTCATCTTACCCCCTGAACCTTCTCCTCCTCCAAACAACCCCCAAAACCTCTCTCCTCTTTTAATCTCTATGCTTATCATTCTTGGGTCCGCTTTTTTTTTAATTACCTTTTATGTCCTCTACACAAAACTCTACTCCCACTTTTATAATTACAGCAATTCCCAAATAAGGTACAGAAGGAGAAGACCTTCAAATACTAATACTAATATTACTAATGATGAGGAACACGGGCCTGCGGCGGTCTTCCACCCAATCTGGTACATCCCAACCGTCGGACTCAACCCCAGCGTGATCAACTCCATCACGGTGTGCAAGTACGGGAGGAGAGAGAAAGACGGAGTACACGTGGAGGGCAGTGATTGCGCGGTTTGTTTAGCGGAGTTTCAACAAGGGGATCAACTCCGTGTTCTCCCTAAATGTAATCACGCTTTTCACATCCCATGTATTGACACCTGGCTTCGATCTCACACCAACTGCCCCCTTTGCCGGGCCCCAGTAGTCGTGGCCCCACATGATCAAACGCCTCAGAATTCGTTATCAAGATTAGCATCATCAGAGGATCATAGCCCAGCTCAGAATTCATCATCGATGGATAGTAATATGAGAAGATCAGCTTCAACGGATTGCGTAGAGAATAATAAAGGGAATGGTGGTGGAGGTAGTTGTGGTGGTTGTTCAAGTCAATCTCAACGGTGGAGTCATCTGGAAAGAGGGGCGGCGAGTTTAGTTAGCCGGTCACTGTCCTGCAGTGCTAACATTTTTTCTTCCAGGTACAACCACAATCATAATCATAATAATAATCATAATAATTCTAATTCGATCAATAATATTAATAATAATGATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATGATAAAGACAATGATGAGAGAAGAGGTCCAAATTCAAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_92656.p1 GENE.R_Transcript_92656~~R_Transcript_92656.p1 ORF type:complete len:395 (+),score=18.90,zf-RING_2|PF13639.2|7e+03,zf-RING_2|PF13639.2|8.8e-14,zf-RING_11|PF17123.1|1.6e-11,zf-rbx1|PF12678.3|1.9e+03,zf-rbx1|PF12678.3|1.6e-09,zf-C3HC4|PF00097.21|2.7e+03,zf-C3HC4|PF00097.21|3.4e-07,zf-ANAPC11|PF12861.3|1.6e-05 R_Transcript_92656:36-1187(+)
MASFQRKLLPKEAQDTNTTTSSTTTTTVKTCLFFCSSQSNQTNPTFVCPEACLAICPSVCHYALEAFILPPEPSPPPNNPQNLSPLLISMLIILGSAFFLITFYVLYTKLYSHFYNYSNSQIRYRRRRPSNTNTNITNDEEHGPAAVFHPIWYIPTVGLNPSVINSITVCKYGRREKDGVHVEGSDCAVCLAEFQQGDQLRVLPKCNHAFHIPCIDTWLRSHTNCPLCRAPVVVAPHDQTPQNSLSRLASSEDHSPAQNSSSMDSNMRRSASTDCVENNKGNGGGGSCGGCSSQSQRWSHLERGAASLVSRSLSCSANIFSSRYNHNHNHNNNHNNSNSINNINNNDNNNNNNNNNNNNNNNNNNNNNNNDKDNDERRGPNSN*

Click here to download the sequence:
Link to NCBI Protein BLAST