Transcript Information: R_Transcript_92775.p1


Annotated TAIR IDAT3G03000.1
Annotated Gene NameEF hand calcium-binding protein family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:677388-677885 | Forward length=165
E-Value3.2E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 143.696482285539
Replicate 245.173858471429
Replicate 339.010868269811
Condition 2: 8 Hour
Replicate 131.015428933177
Replicate 237.132615905969
Replicate 336.523240763445
Condition 3: 24 Hour
Replicate 138.541288497418
Replicate 237.961778938933
Replicate 335.41828576607


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_92775.p1 GENE.R_Transcript_92775~~R_Transcript_92775.p1 ORF type:complete len:165 (+),score=32.46,EF-hand_1|PF00036.28|3.4e-07,EF-hand_1|PF00036.28|9.1e-05,EF-hand_1|PF00036.28|1.6e-07,EF-hand_1|PF00036.28|1.2e-07,EF-hand_7|PF13499.2|6.7e-15,EF-hand_7|PF13499.2|5.2e-17,EF-hand_8|PF13833.2|0.0022,EF-hand_8|PF13833.2|2.6e-07,EF-hand_8|PF13833.2|0.0045,EF-hand_8|PF13833.2|7.8e-11,EF-hand_6|PF13405.2|2.7e-08,EF-hand_6|PF13405.2|0.2,EF-hand_6|PF13405.2|2.3e-07,EF-hand_6|PF13405.2|2.6e+03,EF-hand_6|PF13405.2|0.0019,EF-hand_5|PF13202.2|0.00019,EF-hand_5|PF13202.2|0.0024,EF-hand_5|PF13202.2|0.00011,EF-hand_5|PF13202.2|0.00073,EF-hand_4|PF12763.3|0.00021,EF-hand_4|PF12763.3|1.1e+02,EF-hand_4|PF12763.3|0.52,EF-hand_9|PF14658.2|8.8e-05,EF-hand_9|PF14658.2|0.96,SPARC_Ca_bdg|PF10591.5|0.0016,SPARC_Ca_bdg|PF10591.5|0.054 R_Transcript_92775:812-1306(+)
ATGAGTAGTGAAAAGGGGGCAGTGAAGCTGGACGATGATCAGATCGCAGAATTAAGGGAAATATTCCGCACATTTGATCGGAACAATGACGGAAAGCTAACCCAGCTAGAATTGGGCTCGCTTCTCCGATCATTGGGCCTAAAGCCCAGCGAAGATCAACTGGAGGCCCTAATTCACGCAGCTGATAAGAACAACAATGGTATGATTGAATTCTCAGAGTTCATAGCCTTGGTTGCTCCTGATCTCCTTCCTGCCAAATGCCCTTACACTGAAGACCAACTCAAACAGCTTTTCAAGATGTTTGATAGGGATGGTAACGGCTATATCACGGCTGCTGAGCTGGCACATTCTATGGCCAAACTCGGCCACGCCTTGACAGCTGAGGAGCTCACTGGTATGATCAAGGAGGCTGATACCGACGGCGATGGTTGCATCAGCTTTCAGGAGTTCTCTCAGGCTATTACTTCTGCTGCCTTTGATAATTCCTGGACTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_92775.p1 GENE.R_Transcript_92775~~R_Transcript_92775.p1 ORF type:complete len:165 (+),score=32.46,EF-hand_1|PF00036.28|3.4e-07,EF-hand_1|PF00036.28|9.1e-05,EF-hand_1|PF00036.28|1.6e-07,EF-hand_1|PF00036.28|1.2e-07,EF-hand_7|PF13499.2|6.7e-15,EF-hand_7|PF13499.2|5.2e-17,EF-hand_8|PF13833.2|0.0022,EF-hand_8|PF13833.2|2.6e-07,EF-hand_8|PF13833.2|0.0045,EF-hand_8|PF13833.2|7.8e-11,EF-hand_6|PF13405.2|2.7e-08,EF-hand_6|PF13405.2|0.2,EF-hand_6|PF13405.2|2.3e-07,EF-hand_6|PF13405.2|2.6e+03,EF-hand_6|PF13405.2|0.0019,EF-hand_5|PF13202.2|0.00019,EF-hand_5|PF13202.2|0.0024,EF-hand_5|PF13202.2|0.00011,EF-hand_5|PF13202.2|0.00073,EF-hand_4|PF12763.3|0.00021,EF-hand_4|PF12763.3|1.1e+02,EF-hand_4|PF12763.3|0.52,EF-hand_9|PF14658.2|8.8e-05,EF-hand_9|PF14658.2|0.96,SPARC_Ca_bdg|PF10591.5|0.0016,SPARC_Ca_bdg|PF10591.5|0.054 R_Transcript_92775:812-1306(+)
MSSEKGAVKLDDDQIAELREIFRTFDRNNDGKLTQLELGSLLRSLGLKPSEDQLEALIHAADKNNNGMIEFSEFIALVAPDLLPAKCPYTEDQLKQLFKMFDRDGNGYITAAELAHSMAKLGHALTAEELTGMIKEADTDGDGCISFQEFSQAITSAAFDNSWT*

Click here to download the sequence:
Link to NCBI Protein BLAST