Transcript Information: R_Transcript_92916.p1


Annotated TAIR IDAT5G42190.1
Annotated Gene NameE3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein
Annotated Gene Symbol(s)ASK2, SKP1B
Annotation TypeOrtholog
Chromosome Positionchr5:16854495-16855516 | Reverse length=171
E-Value1.5E-95
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1538.96015619024
Replicate 2483.93291201928
Replicate 3528.93739540207
Condition 2: 8 Hour
Replicate 1528.8946828605
Replicate 2661.61106150708
Replicate 3641.24689882567
Condition 3: 24 Hour
Replicate 1573.11035133887
Replicate 2540.28700870129
Replicate 3555.15178251312


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_92916.p1 GENE.R_Transcript_92916~~R_Transcript_92916.p1 ORF type:complete len:165 (+),score=52.77,Skp1|PF01466.15|6.1e-43,Skp1_POZ|PF03931.11|2.1e-30 R_Transcript_92916:76-570(+)
ATGTCGAAGAAGGTGACACTCAAGAGCTCCGATGGCGAGACCTTCGAGGTGGATGAGGCTGTGGCTTTGGAGTCGCAAACAATCAAGCATATGATTGAAGATGACTGCGCCGACAACGCAATTCCTCTCCCCAACGTCACTGGAAAGATCCTTTCCAAGGTGATCGAGTACTGCAAGAGGCACGTTGAGGCTGCTGCTTCCAAGTCTTCTGTCACCGAGGATCGTTCTTCTTCTGCTTCTTCTGGTGCTGACGATGATATCAAGACTTGGGATGCTGAGTTCGTCAAAGTTGACCAGAATACCCTCTTCGATCTCATCTTGGCTGCTAACTACCTGAACATCAAGAGCCTGCTGGACTTGACATGCCAAGCTGTTGCTGATATGATCAAAGGGAAGACCCCAGAGGAGATCAGGAAGACCTTCAACATCAAGAATGACTTCACCCCAGAGGAGGAAGAGGAAGTTAGAAGGGAGAACCAGTGGGCCTTTGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_92916.p1 GENE.R_Transcript_92916~~R_Transcript_92916.p1 ORF type:complete len:165 (+),score=52.77,Skp1|PF01466.15|6.1e-43,Skp1_POZ|PF03931.11|2.1e-30 R_Transcript_92916:76-570(+)
MSKKVTLKSSDGETFEVDEAVALESQTIKHMIEDDCADNAIPLPNVTGKILSKVIEYCKRHVEAAASKSSVTEDRSSSASSGADDDIKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQAVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE*

Click here to download the sequence:
Link to NCBI Protein BLAST