Transcript Information: R_Transcript_92921.p1


Annotated TAIR IDAT5G42190.1
Annotated Gene NameE3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein
Annotated Gene Symbol(s)ASK2, SKP1B
Annotation TypeOrtholog
Chromosome Positionchr5:16854495-16855516 | Reverse length=171
E-Value1.4E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.7650834307699
Replicate 211.746182051076
Replicate 39.7714055480091
Condition 2: 8 Hour
Replicate 16.5067333426246
Replicate 26.0984223203233
Replicate 35.9659139801272
Condition 3: 24 Hour
Replicate 17.2244847919349
Replicate 26.0150706065211
Replicate 35.5101913897084


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_92921.p1 GENE.R_Transcript_92921~~R_Transcript_92921.p1 ORF type:complete len:143 (+),score=31.16,Skp1_POZ|PF03931.11|1.5e-30 R_Transcript_92921:76-504(+)
ATGTCGAAGAAGGTGACACTCAAGAGCTCCGATGGCGAGACCTTCGAGGTGGATGAGGCTGTGGCTTTGGAGTCGCAAACAATCAAGCATATGATTGAAGATGACTGCGCCGACAACGCAATTCCTCTCCCCAACGTCACTGGAAAGATCCTTTCCAAGGTGATCGAGTACTGCAAGAGGCACGTTGAGGCTGCTGCTTCCAAGTCTTCTGTCACCGAGGATCGTTCTTCTTCTGCTTCTTCTGGTGCTGACGATGATATCAAGACTTGGGATGCTGAGTTCGTCAAAGTTGACCAGAATACCCTCTTCGATCTCATCTTGCCCATCTATGTTGCACGGGGACGGAAATGGAAACGGTTGTGTGTACGGAAACGGGGATGGGGAAACAGCAAAATCCAAAAATCAAGAAACGGGCTGCTAACTACCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_92921.p1 GENE.R_Transcript_92921~~R_Transcript_92921.p1 ORF type:complete len:143 (+),score=31.16,Skp1_POZ|PF03931.11|1.5e-30 R_Transcript_92921:76-504(+)
MSKKVTLKSSDGETFEVDEAVALESQTIKHMIEDDCADNAIPLPNVTGKILSKVIEYCKRHVEAAASKSSVTEDRSSSASSGADDDIKTWDAEFVKVDQNTLFDLILPIYVARGRKWKRLCVRKRGWGNSKIQKSRNGLLTT*

Click here to download the sequence:
Link to NCBI Protein BLAST