Transcript Information: R_Transcript_93000.p1


Annotated TAIR IDAT4G32300.1
Annotated Gene NameS-domain-2 5
Annotated Gene Symbol(s)SD2-5
Annotation TypeOrtholog
Chromosome Positionchr4:15599970-15602435 | Forward length=821
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.7287161950532
Replicate 23.2282447371306
Replicate 33.9656942811741
Condition 2: 8 Hour
Replicate 13.0829660466265
Replicate 22.3010592693714
Replicate 32.5491366004417
Condition 3: 24 Hour
Replicate 15.419821318889
Replicate 22.9104397325338
Replicate 36.3861220696637


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_93000.p1 GENE.R_Transcript_93000~~R_Transcript_93000.p1 ORF type:complete len:826 (+),score=149.06,Pkinase|PF00069.21|3.1e-51,Pkinase_Tyr|PF07714.13|3.8e-45,B_lectin|PF01453.20|4.1e-20,B_lectin|PF01453.20|2.7e+02 R_Transcript_93000:797-3274(+)
ATGGGAAACTGGGGTTTCAATCACTTCATAGTACTCCCCATATGCTTGCTTGTTTTCCTTTTATTACCAAGATCATGTAGTGCAAGTATTCAACTCATAGGGACCATGACACCAGGAACTTCAGCCTCTCAAATGGGTTATATTGACAATGATGGGTTATTTCTCTTGTCTAATGACAGTAGCTTTGCATTTGGGTTCAAAACAACCCAAGATGTAACTCAATTCCTATTGGTAATTATTCACCAGGATAGCTCCACTGTTGTGTGGACAGCAAATAGAGGCTCACCAGTTGCAAATTCTGACAGTTTTGTGTTTGATAGTAAGGGCAAAGTGAGCCTTCAAAGTGGTGGAAAACCCATTTGGGTACCTGATACTGGTGGCAAACCAGTTTCTTCTGTTGAGTTGCAGAATTCAGGAAATCTGGTGTTGCTTGGGAGTGATAATAATGTGGTTTGGCAAAGTTTTAGCCATCCTACCAATACGCTTCTTTCGAGTCAGGATTTCACTGAAGGGATGAAGCTTGTGAGTGATTTGGATCCCAAGAGGGATAACTTGACTTACGTACTTGAGATTCAACCTGGGGATTTAAATCTTTATGCTGGGTATAAGACACCACAGACTTATTGGTCTATGTCAAGGGATAGCCGGAAAATCATTAACAAGGATGGTGGTGGAGTTAGTTCAGCAAGGATTGAGGGGAATTCCTGGAAGTTTTATGATCAAAATAAAGTTTTGTTGTGGCAATTTGTGATCACCCCAAATACTGGGAATTCTACTTGGATTGCAGTGCTTGGGAGTGATGGTTTTGTAAGCTTTTATAATCTCGGGACAGGTTCATCGAAGGTGCCTGCCTCGATTAAAATCCCTAGCGATCCATGTGGAACTCCAGAGCCCTGTAATAGTCCCTATGAAGCTTGTTCTAGCTCTAATAACAGGTGCCTGTGCCCTTCAGGACTCCTCTCTCGGAACTGCAAAACCGGGATCTCCTCTCCTTGTGGAAGTGCAGAGGAACCTGTTAAGCTGATCTCTGCAGGAGATGGTCTGAGCTATTTTGCTCTTGGATTTGTTAAGCCTAGCTCGAAAACTGATCTCAATGGGTGCAAGGCATCTTGTGCTGGTAATTGTTCATGCCTTGCTTTGTTCTTTGACAACAGTTCAGAGAGCTGTTACCTGTTTGATAGGGTTGGAAGCTTCCAATCTGACAGCGCATCCAAGTATTCCGTCTATGTAAAGGTCTCGATGAATGGGGATGATCCTGGAAATGGTAGCAATAGAAATAGTAGTAAGCATTTGGCTGTCATCATAACCATAGCCATTCTGACAGTATTCATCATTTTGGGTATGGTTTTCGTAGGGTACAAGTATCACAAGAAGAAGAGACAATTGCCTGAATCTCCTCAGGATACTTCGGAAGAAGATAATTTCCTCGACACATTGGCAGGGATGCCTGTAAGGTACAGCTACAAGGATCTGCAAGATGCTACCGATAACTTCACTGTGAAGCTAGGGCAAGGAGGGTTTGGGTCGGTTTACCAAGGGAAACTTTCAGACGGAACCCAAATTGCTGTCAAGAAATTGGAAGGGGTTGGACAAGGAAGAAAGGAGTTCCGAGCTGAAGTGGGGATTATAGGCAGCATTCATCATGTTCATTTGGTAAGACTAAGAGGCTTTTGCACGGAAGGCAGTCACCGCCTTCTAGCCTATGAATTCATGGCAAATGGGTCCTTAGACAAGTGGATATTCAAGAAAAACAAGAACAATGAGTCGGTTTTGGATTGGGAAACGAGGTACAATATTGCTGTTGGAACTGCCAAGGGATTGGCTTATCTCCATGAGGACTGTGATGTGAAGATTGTTCATTGTGACATAAAACCCGAGAATGTGCTTCTTGATGATCATTTTGAGGCAAAGGTGTCGGATTTTGGGTTAGCAAAGTTGATGACGAGGGAGCAAAGCCACGTTTTCACCACTCTTCGAGGCACCAGGGGATACTTAGCACCAGAATGGATCACAAACTATGCAATATCAGAGAAAAGCGATGTTTACAGCTATGGAATGGTCCTGCTTGAAATCATCGGGGGAAGGAAAAACTACGACCCTTTACAATCATCGGAGAAATCACATTTCCCGGCTTATGCATTCAAGATGATGGAGGAAGGCAAGCTAAGGGAAATCCTCGATTCAAGCCTTAGGTATGACCCCAACGAAGAAAGCGTTCAGACAGCAATCAAGGTTGCACTATGGTGCATCCAGGAAGACATGACAATGAGGCCTTCTATGACCAAAGTTGCTCAAATGCTTGAAGGGATATCTCCTGTTCCCCTTCCTCCAACATCATCCTTAACAGGAGCAAGGCTTTTCTCGAGTTTTTTCAGGTCATTGAGTGAGGAAGGAACCAACACTGGCACCTCATCTGGTCCATCTGAATGCTACAGCGATGCTTACCTCTCGGCTGTCCGCCTCTCAGGACCAAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_93000.p1 GENE.R_Transcript_93000~~R_Transcript_93000.p1 ORF type:complete len:826 (+),score=149.06,Pkinase|PF00069.21|3.1e-51,Pkinase_Tyr|PF07714.13|3.8e-45,B_lectin|PF01453.20|4.1e-20,B_lectin|PF01453.20|2.7e+02 R_Transcript_93000:797-3274(+)
MGNWGFNHFIVLPICLLVFLLLPRSCSASIQLIGTMTPGTSASQMGYIDNDGLFLLSNDSSFAFGFKTTQDVTQFLLVIIHQDSSTVVWTANRGSPVANSDSFVFDSKGKVSLQSGGKPIWVPDTGGKPVSSVELQNSGNLVLLGSDNNVVWQSFSHPTNTLLSSQDFTEGMKLVSDLDPKRDNLTYVLEIQPGDLNLYAGYKTPQTYWSMSRDSRKIINKDGGGVSSARIEGNSWKFYDQNKVLLWQFVITPNTGNSTWIAVLGSDGFVSFYNLGTGSSKVPASIKIPSDPCGTPEPCNSPYEACSSSNNRCLCPSGLLSRNCKTGISSPCGSAEEPVKLISAGDGLSYFALGFVKPSSKTDLNGCKASCAGNCSCLALFFDNSSESCYLFDRVGSFQSDSASKYSVYVKVSMNGDDPGNGSNRNSSKHLAVIITIAILTVFIILGMVFVGYKYHKKKRQLPESPQDTSEEDNFLDTLAGMPVRYSYKDLQDATDNFTVKLGQGGFGSVYQGKLSDGTQIAVKKLEGVGQGRKEFRAEVGIIGSIHHVHLVRLRGFCTEGSHRLLAYEFMANGSLDKWIFKKNKNNESVLDWETRYNIAVGTAKGLAYLHEDCDVKIVHCDIKPENVLLDDHFEAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDPLQSSEKSHFPAYAFKMMEEGKLREILDSSLRYDPNEESVQTAIKVALWCIQEDMTMRPSMTKVAQMLEGISPVPLPPTSSLTGARLFSSFFRSLSEEGTNTGTSSGPSECYSDAYLSAVRLSGPR*

Click here to download the sequence:
Link to NCBI Protein BLAST