Transcript Information: R_Transcript_93169.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value4E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.9767470745
Replicate 20.91288262679557
Replicate 30.91933395034725
Condition 2: 8 Hour
Replicate 10.24567757472152
Replicate 20.67307002197549
Replicate 30.91061591741072
Condition 3: 24 Hour
Replicate 10.8446016036948
Replicate 20.59010726128635
Replicate 31.6836695912998


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_93169.p1 GENE.R_Transcript_93169~~R_Transcript_93169.p1 ORF type:complete len:299 (+),score=51.65,RVT_1|PF00078.23|1.3e-41 R_Transcript_93169:849-1745(+)
ATGGATAGGGATAAGTCTCCAGGTGCAGATGGCTTTACTATGGCTTTCTTTCAGGATTGCTGGGAAGTGGTCAAGGATGATCTCCTTCGGGTTATTGAGGAGTTTCATGAGCAGGGAGTCATGTGCCGGAGTCTGAACTCCACCTTCATTACTCTTGTTCCCAAGAAGGATAGATCGATTAAGGTTCGGGATTTCAGGCCAATTAGTCTGGTGACTAGTGTCTATAAGATTATAACCAAGCTCCTGTCTATTCGCTTGGGCGCGGTGTTGCCTTCTACGATTTCTACTTCACAGAGTGCTTTCGTTGAGGGTAGGCAAATCTTGGACGCTGCTCTCGTGGCTAATGAGGTGGTGGATGATGCTCGGAGGTCGGGGTTCAATGGGATGGTCTTCAAGCTTGACTTTGAGAAGGCCTATGATAGAGTTAGTTGGGCTTTCCTTGATCGGGTACTCCAACGTAAGGGGTTCGGGGAGAGATGGAGGCAGTGGGTGAGGGGTTGTTCCTCTAATGCTGCGTTCTCTGTTTTGGTGAATGGGGCCCCAAGGGAGTGGTTCACGTCCTCCCGGGGGTTGAGACAAGGGGACCCCCTGTCCCCTTTCCTGTTTACTTTGGTGGCAGATGTGCTTAGTAGGCTGTTGGATAGGGCGGTGGATAGAGGAGTGGTGGATGGTTTTCATGTAGGGAGAGAGGTTCTGCGGGTCTCACATTTGCTGTTTGCAGATGATGCTATTCTGTTTCTGGGAAAGGATCTGTCGAGTTTTAGACACGTGCTTACTATCTTGCAAGTGTTTGAGGCTATTTCGGGTATGCGGGTCAATCTTGGCAAATGTAGTTTGGTTGGGGTCAACATGGACCCAGAGGTTTTGAATTCTTATGCTTTGTTGGCTGGCTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_93169.p1 GENE.R_Transcript_93169~~R_Transcript_93169.p1 ORF type:complete len:299 (+),score=51.65,RVT_1|PF00078.23|1.3e-41 R_Transcript_93169:849-1745(+)
MDRDKSPGADGFTMAFFQDCWEVVKDDLLRVIEEFHEQGVMCRSLNSTFITLVPKKDRSIKVRDFRPISLVTSVYKIITKLLSIRLGAVLPSTISTSQSAFVEGRQILDAALVANEVVDDARRSGFNGMVFKLDFEKAYDRVSWAFLDRVLQRKGFGERWRQWVRGCSSNAAFSVLVNGAPREWFTSSRGLRQGDPLSPFLFTLVADVLSRLLDRAVDRGVVDGFHVGREVLRVSHLLFADDAILFLGKDLSSFRHVLTILQVFEAISGMRVNLGKCSLVGVNMDPEVLNSYALLAGC*

Click here to download the sequence:
Link to NCBI Protein BLAST