Transcript Information: R_Transcript_93208.p1


Annotated TAIR IDAT4G15410.1
Annotated Gene Nameserine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma
Annotated Gene Symbol(s)PUX5
Annotation TypeOrtholog
Chromosome Positionchr4:8814868-8816596 | Forward length=421
E-Value1.2E-139
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 134.502548146115
Replicate 233.901343598998
Replicate 332.628133551593
Condition 2: 8 Hour
Replicate 131.652459565951
Replicate 232.341470565422
Replicate 338.959554502294
Condition 3: 24 Hour
Replicate 138.860288331772
Replicate 238.30083982949
Replicate 338.917406626215


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_93208.p1 GENE.R_Transcript_93208~~R_Transcript_93208.p1 ORF type:complete len:410 (+),score=89.85,SEP|PF08059.9|6e+03,SEP|PF08059.9|4.6e-27,UBX|PF00789.16|6e-16,UBA_4|PF14555.2|3.7e-13 R_Transcript_93208:193-1422(+)
ATGGCATCGCAAGACCAAAACCCTAACGAAAACCTAATCAACATGTTCAAAGAGATAACATCAGCTACAACCCAAGAAGCTCAATTCTACCTCGAAAGCCACAATTTCGACGTCGATGCAGCTGTTTCCACCTTCTTCGAATCATCATCAGCAATGGCTGCCATTCCTCCTGAACTTGAACAACAACAACAACATGAAGAAGAGAATCCTTCGCCTTCTTCTCCTTCGGCCTCTCTCTCTCCTTCTCCTTCACCTTCTCGCTCTCGATCGCACTCTCCCCCTCTTGCTGATGCCCAAATTCGATCGCAATATAATCTCCGATCTCGAAGAAACCCTAGCGATTCGGGTCGGGCCAGGCAAGCTGGTATTCGGACCTTCTCGGATCTCAATCGGAGTGGCGCTGGTGGTGAGGGTAGTGATTCTGATTCTGATCAACCCCCTCAGTACTTTACTGGTGGCCAGAAAAGTGGAATGCTTGTTCAAGATCCTTCCAAAGGTACCGATATCAATGCACTTTTCGAGCAAGCTAGACAGATGGGAGCTATGCCAGGACCAGCTGATGTTCACCAGCCATCTTCAAGCTCACGAAGTTTTACTGGAACTGCTAGAAAATTATCTGGAGAGACTGTATCTGGTTTACCCGAGCAGCCTCCTGAGGCTGTTACCCATACCATCACCTTTTGGCGCAATGGGTTTACTGTGGATGATGACCCTTTGAGGAGCTTTGATGATCCAGAAAACGCATCGTTTTTGGAGAGCATCAAGAATTCGGAGTGTCCAAGAGAGCTGGAGCCTGCAGACAGGAGGACTTCTGTTCATGTTAATCTCGTGAGGAAGGATGAGAACTGCCCCGAACCAGAAAAGCGAAAAATGTCATTCCAGGGTGCCGGGAGGACACTTGGTACTAGTAGCTCAGTCCCTTCTGAACCCCCTGTTGATGCGGCTGCTGTGTGTGCTGCTCCATCTCCAGTCGCAGGCCTAGTTGTGGATGAAAATTTACCATCGACTTCAATCCAGCTGAGATTGGCTGATGGGACTCGCATGGTCTCACGCTTCAACTACCATCACACAATTAGGGACATTCACGCCTTCATTGATGCATCAAGGCCCGGTAGAGCTGGCACTTACACACTTCAGACGATGGGTTTTCCTCCTAAGAAGCTGACCGAGCTTGATCAGTCGATAGAGCAGGCCAGTCTTGCCAACTCCGTTGTCATCCAGAAATTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_93208.p1 GENE.R_Transcript_93208~~R_Transcript_93208.p1 ORF type:complete len:410 (+),score=89.85,SEP|PF08059.9|6e+03,SEP|PF08059.9|4.6e-27,UBX|PF00789.16|6e-16,UBA_4|PF14555.2|3.7e-13 R_Transcript_93208:193-1422(+)
MASQDQNPNENLINMFKEITSATTQEAQFYLESHNFDVDAAVSTFFESSSAMAAIPPELEQQQQHEEENPSPSSPSASLSPSPSPSRSRSHSPPLADAQIRSQYNLRSRRNPSDSGRARQAGIRTFSDLNRSGAGGEGSDSDSDQPPQYFTGGQKSGMLVQDPSKGTDINALFEQARQMGAMPGPADVHQPSSSSRSFTGTARKLSGETVSGLPEQPPEAVTHTITFWRNGFTVDDDPLRSFDDPENASFLESIKNSECPRELEPADRRTSVHVNLVRKDENCPEPEKRKMSFQGAGRTLGTSSSVPSEPPVDAAAVCAAPSPVAGLVVDENLPSTSIQLRLADGTRMVSRFNYHHTIRDIHAFIDASRPGRAGTYTLQTMGFPPKKLTELDQSIEQASLANSVVIQKF*

Click here to download the sequence:
Link to NCBI Protein BLAST