Transcript Information: R_Transcript_93245.p2


Annotated TAIR IDAT3G23560.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)ALF5
Annotation TypeOrtholog
Chromosome Positionchr3:8454361-8456588 | Reverse length=477
E-Value2.9E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.9200786037121
Replicate 23.807021504054
Replicate 35.2861702144967
Condition 2: 8 Hour
Replicate 14.9778956211432
Replicate 26.757409347611
Replicate 37.7792616944516
Condition 3: 24 Hour
Replicate 18.9560676547637
Replicate 28.2404263986772
Replicate 38.2980858428347


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_93245.p2 GENE.R_Transcript_93245~~R_Transcript_93245.p2 ORF type:5prime_partial len:182 (+),score=21.57,MatE|PF01554.14|2.7e-27 R_Transcript_93245:3-548(+)
AAAAAGAAGAATAAGAAGACACAAATTAAGATGAGAGGGAATAACGGCAGCAACAAGGATGTTAGAGTGCCGTTGTTGGTTGGGGAGAAAACTAAGTGGTTGGAGAAGGTGGTGGATGTGGAGGAAGGCAAGAAGCAGATGCTGTTAGCACTGCCATTGGTGGTCACCAACGTCTGTTATTATCTGATCCCTTTGGTCTCCGTCATGTTCGCCGGCAACCTTTGTGAGCTTCAGCTCGCTGGCTCCACCCTCGCCAACTCTTGGGCAACCGTCTCTGGCTACGCCTTCATGATTGGTATTGGCAGTGCTGTTGAAACTCTCTGTGGGCAAGGATTTGGTGCACAATGTTACAATATGTTGGGAATATATCTTCAAGCATCCTGCATAATTTCATTCCTGTTTTCCATCCTCATATCCATGCTATGGTGGTACACTGAACCCATCCTAGAGCTACTTCACCAAAGCCCTGATATCTCCAAAGAAGCCAACGCCTACATAAGATATTTAATTCCAGGATTATTCGCATTTGGTATCCTACAAACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_93245.p2 GENE.R_Transcript_93245~~R_Transcript_93245.p2 ORF type:5prime_partial len:182 (+),score=21.57,MatE|PF01554.14|2.7e-27 R_Transcript_93245:3-548(+)
KKKNKKTQIKMRGNNGSNKDVRVPLLVGEKTKWLEKVVDVEEGKKQMLLALPLVVTNVCYYLIPLVSVMFAGNLCELQLAGSTLANSWATVSGYAFMIGIGSAVETLCGQGFGAQCYNMLGIYLQASCIISFLFSILISMLWWYTEPILELLHQSPDISKEANAYIRYLIPGLFAFGILQT*

Click here to download the sequence:
Link to NCBI Protein BLAST