Transcript Information: R_Transcript_93259.p1


Annotated TAIR IDAT3G08490.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein, group 2 (TAIR:AT3G24600.1); Has 161 Blast hits to 158 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:2574105-2575125 | Reverse length=271
E-Value5E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7272622898327
Replicate 21.7183672974975
Replicate 31.6403801859137
Condition 2: 8 Hour
Replicate 10.50098956413801
Replicate 20.85783434173346
Replicate 31.5784009235119
Condition 3: 24 Hour
Replicate 11.2917436291803
Replicate 20.62048042914668
Replicate 32.6310028651769


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_93259.p1 GENE.R_Transcript_93259~~R_Transcript_93259.p1 ORF type:complete len:391 (+),score=52.32 R_Transcript_93259:210-1382(+)
ATGAAAAACAATATGGAAGGTGGAGAGGAAGAAGCAATTTTGGGTTATGGTGGTTACTATGTCCAAAGCCCCTCCTCTGTTTCTCATGCAAACAGCACCGATTTAGGCCGAAACTCTGAAGTAATGTTTTTACCCTACCACCATAATTACCAACACTCTGCTCCTCTCAAAGAAGAAGAACAAGTTCAAGATCAAGAAGAAGAAGCTAATTTAGATCACGCCTCCAGAGCAAGTACTCGTTGCTCGTCGTCTCGAGTTTCCTTCAATTTCTTCACTGAGGAACCCAAGAAGATGATGATGCATAATACTAACAATAATGCATCTAGTTTAGATCATAGCTGCAAAATCGTGATCGTGAACAATAATAATGGGAATGCCAAGAATTCGCATTACTCTGTTTCCAGAAAGTTAGGAGATGATCGTATCGTTGATGATAATTATGGTGAACATAATCATATTCTTGTAAGTCATAAGTATGATAATGAAGATGGAGGTGATGAAGAAGAAGAGGAAGATTATTTTGTTGGAAACAAGGGCGGATGTTGGAAGTATTTATCAATGCATACATATCCAGCATCTTTTGTGTGGATAGCTATTCAACTTATATGGAGGTTCTTTGTTAGCTTTCTTGTTGCTTTGCTCGTCTTCTACCTTGCTACCAAGCCTCCTCCTCCACATTTTTCCGTCCAGGTTGTAGGGGTGAACCAATTTGAGCTAACAGAGGGAGTGGATTCTTCGGGTGTAGGAACAAATTTCTTAACCTGCAACGTTTCTGTGGCGCTTGTAATTGACAACAAATCCAGGGTTTTCGGACTTCATGTTCTCCCTCCACTCATACAAATGTATTTCGCCAGGGATCCTTTCGTGGCCTCCCAAGGTTCCAGAGTGTATGTAGGGAGCCATCATTCAGCAGGGTTGAAGGTATACGTAGGAGTGACAAGTAAGGCAATGTACGGAGCAGGGAGGAACATGCAAGACATGCTTAATTCTGGGAAAGGAATGCCCACACTCATCACTCTCTCCTTTAAGTCTTATTTCAAAGTATTTGGGAGGCTCATTCAACCCACATTCCACCACAATGCTCGTTGTTTTTGGCCATTCAGAATTTCTATGACAAGAACCACAAAACCCAGTCCTACAATACTACTTGCAGCTTCCTCACTTACTAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_93259.p1 GENE.R_Transcript_93259~~R_Transcript_93259.p1 ORF type:complete len:391 (+),score=52.32 R_Transcript_93259:210-1382(+)
MKNNMEGGEEEAILGYGGYYVQSPSSVSHANSTDLGRNSEVMFLPYHHNYQHSAPLKEEEQVQDQEEEANLDHASRASTRCSSSRVSFNFFTEEPKKMMMHNTNNNASSLDHSCKIVIVNNNNGNAKNSHYSVSRKLGDDRIVDDNYGEHNHILVSHKYDNEDGGDEEEEEDYFVGNKGGCWKYLSMHTYPASFVWIAIQLIWRFFVSFLVALLVFYLATKPPPPHFSVQVVGVNQFELTEGVDSSGVGTNFLTCNVSVALVIDNKSRVFGLHVLPPLIQMYFARDPFVASQGSRVYVGSHHSAGLKVYVGVTSKAMYGAGRNMQDMLNSGKGMPTLITLSFKSYFKVFGRLIQPTFHHNARCFWPFRISMTRTTKPSPTILLAASSLTS*

Click here to download the sequence:
Link to NCBI Protein BLAST