Transcript Information: R_Transcript_93270.p1


Annotated TAIR IDAT5G61800.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24830054-24831553 | Reverse length=499
E-Value3E-166
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.4724892247853
Replicate 23.8317270778347
Replicate 34.0524023680344
Condition 2: 8 Hour
Replicate 14.3773613313511
Replicate 24.9135643524393
Replicate 36.3209519292595
Condition 3: 24 Hour
Replicate 16.9685709089679
Replicate 25.4214044200302
Replicate 36.4399578035936


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_93270.p1 GENE.R_Transcript_93270~~R_Transcript_93270.p1 ORF type:complete len:537 (+),score=93.33,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|0.0039,PPR|PF01535.16|0.0052,PPR|PF01535.16|1.2e-05,PPR|PF01535.16|35,PPR|PF01535.16|1.2,PPR|PF01535.16|0.00066,PPR|PF01535.16|0.22,PPR|PF01535.16|0.0073,PPR|PF01535.16|3.3,PPR|PF01535.16|5.5,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|0.26,PPR_2|PF13041.2|0.0089,PPR_2|PF13041.2|2.6e-06,PPR_2|PF13041.2|8.2e+02,PPR_2|PF13041.2|0.00015,PPR_2|PF13041.2|3.3,PPR_2|PF13041.2|46,PPR_2|PF13041.2|28,PPR_2|PF13041.2|1.8e+02,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|12,PPR_3|PF13812.2|12,PPR_3|PF13812.2|4.5,PPR_3|PF13812.2|13,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|5.4,PPR_3|PF13812.2|25,PPR_3|PF13812.2|8.5e+03,PPR_3|PF13812.2|46,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|0.099,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|0.0073,PPR_1|PF12854.3|78,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|0.73,PPR_1|PF12854.3|3.2e+03,PPR_1|PF12854.3|5.8e+03 R_Transcript_93270:1542-3152(+)
ATGATCGGGGCAAGGGACAAGAAGAAGCAGTTAGTGTTGGATTCTTTGAAGCATTGTAAAACCTTTTGTCAGCTCCACCAAGTCCATGGTCATGCAATTACTACAGGTATCCTGAATCAACACCCTTGTTCTGTCTTTCCAAACATCTTATGCACAATTACCCGCCTCACTGCGACTACCCACATGTCGGCTTCCACTTGTCATGGCCATAGTGTGATGACCTATGCGTTTTCAGTGTTCAACCACATTAGAAACCCAACCACTTTCTGCTACAACACAATGATGCGAACCCTGACCCTCTTATCTGCTCCTGCATCAACACTCCTCCTCTTCACCCATATGTACCGCCTTTCTGTTCCTCCTGACTTCTACACTTTTCCATTTGCCATTAAGGCCTCTGGCCACCTCCGTTTGCCTTCAATTGCTGCTGCACTTCATTCCCAAACCATGAAATTTGGCTTTATATCTGACATATTTATTCTCAATTCCATAATTCATGTTTATGCTAAATGTGATCGGCTCAGGGATGCACTATCGATCTTTGAAGAATATGACCATAAGGATATCGTGTCACACAATGCATTGATTGATGGCTTTATAAAGGCTGGAGACACCATACAATCGCGTGCACTCTTTGATAGCATGACAGTTCGTGATGCTGTCTCTTGGGGTACTCTCATGGCTGGCTATGCCAAAATGAACCAATGCCAGGAGGCCATTGACCTCTTTAATAGCATGCTTCATTCTCCATCTGGAGTTTGTCCAGACAACATTGCCTTAGTCTCAGTTCTTTCTGCCTGTGCACAACTTGGGGATCTGGAGCAAGGCAGAGCAGTCCATGATTATATCATGGATAATAAAATATGGGTAGATTCCTTCTTATCAACTGGCTTGGTGGACTTGTATGCAAAGTGTGGCTGCATTGAGACTGCTATACAGATATTTGAAACAAGTTCGGAGAAAAATTTGACCACATGGAATGCTATGTTAATGGGGCTTGCGGTGCATGGCCATGGAAGATCATCCATTAATTGCTTCCACAGGATGATAAATGATGGGCTTCAACCAGATGGACTCAGCTTCTTAGCAGTCCTGGTTGGATGCAGTCATGCAGGCCTCATTTGTGAAGCTCATAAACTTTTTCAGAATATGGAATCTGTGTATGGGGTTCCTCGAGAGCTAAAGCACTATGGCTGCATGGCTGATTTGCTCGGACGTGCTGGTCTGATAAGAGAAGCGCTGGAAATGATTGAACAGATGCCCATGCAGGGTGACATCTATACATGGGGAGGCTTGCTTGCTGGCTGCAGAAAACATGGGCTGCTTGAAATTGCAGAGGACATAGCCAAGTATTTGCAGAATTCAAACACTGAAGATGCTGGGGTTTACTCGGTAATGGTTAATATATATGCCACTTCAGGTATGTGGGATGATGTTGCCAAGACTCGGAGTTTGTTGAGGACAAGAAAGGTCAAGAAAAATGCTGGGTATAGCTCAATTAAATTGAACGGTGTCACTCATGAGTTCATTGCTAGCGACAATTTGCATCCTCAAACTGATGAGATCTATATGGTTCTGAGTGGACTTGGAAGTCTTGGAATTGAAGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_93270.p1 GENE.R_Transcript_93270~~R_Transcript_93270.p1 ORF type:complete len:537 (+),score=93.33,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|0.0039,PPR|PF01535.16|0.0052,PPR|PF01535.16|1.2e-05,PPR|PF01535.16|35,PPR|PF01535.16|1.2,PPR|PF01535.16|0.00066,PPR|PF01535.16|0.22,PPR|PF01535.16|0.0073,PPR|PF01535.16|3.3,PPR|PF01535.16|5.5,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|0.26,PPR_2|PF13041.2|0.0089,PPR_2|PF13041.2|2.6e-06,PPR_2|PF13041.2|8.2e+02,PPR_2|PF13041.2|0.00015,PPR_2|PF13041.2|3.3,PPR_2|PF13041.2|46,PPR_2|PF13041.2|28,PPR_2|PF13041.2|1.8e+02,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|12,PPR_3|PF13812.2|12,PPR_3|PF13812.2|4.5,PPR_3|PF13812.2|13,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|5.4,PPR_3|PF13812.2|25,PPR_3|PF13812.2|8.5e+03,PPR_3|PF13812.2|46,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|0.099,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|0.0073,PPR_1|PF12854.3|78,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|0.73,PPR_1|PF12854.3|3.2e+03,PPR_1|PF12854.3|5.8e+03 R_Transcript_93270:1542-3152(+)
MIGARDKKKQLVLDSLKHCKTFCQLHQVHGHAITTGILNQHPCSVFPNILCTITRLTATTHMSASTCHGHSVMTYAFSVFNHIRNPTTFCYNTMMRTLTLLSAPASTLLLFTHMYRLSVPPDFYTFPFAIKASGHLRLPSIAAALHSQTMKFGFISDIFILNSIIHVYAKCDRLRDALSIFEEYDHKDIVSHNALIDGFIKAGDTIQSRALFDSMTVRDAVSWGTLMAGYAKMNQCQEAIDLFNSMLHSPSGVCPDNIALVSVLSACAQLGDLEQGRAVHDYIMDNKIWVDSFLSTGLVDLYAKCGCIETAIQIFETSSEKNLTTWNAMLMGLAVHGHGRSSINCFHRMINDGLQPDGLSFLAVLVGCSHAGLICEAHKLFQNMESVYGVPRELKHYGCMADLLGRAGLIREALEMIEQMPMQGDIYTWGGLLAGCRKHGLLEIAEDIAKYLQNSNTEDAGVYSVMVNIYATSGMWDDVAKTRSLLRTRKVKKNAGYSSIKLNGVTHEFIASDNLHPQTDEIYMVLSGLGSLGIEA*

Click here to download the sequence:
Link to NCBI Protein BLAST