Transcript Information: R_Transcript_93351.p1


Annotated TAIR IDAT2G23780.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:10123551-10124234 | Reverse length=227
E-Value1.4E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.2338508359165
Replicate 210.127627259626
Replicate 39.4321860690039
Condition 2: 8 Hour
Replicate 17.4897939838632
Replicate 28.6812835383426
Replicate 37.9012893288743
Condition 3: 24 Hour
Replicate 17.2924799429178
Replicate 28.3031562882173
Replicate 38.4975794666778


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_93351.p1 GENE.R_Transcript_93351~~R_Transcript_93351.p1 ORF type:5prime_partial len:85 (-),score=1.98,zf-C3HC4_3|PF13920.2|3.4e-11,zf-C3HC4_2|PF13923.2|1e-09,zf-C3HC4|PF00097.21|1.5e-09,zf-RING_5|PF14634.2|5.7e-09,zf-RING_2|PF13639.2|2.5e-08,zf-C3HC4_4|PF15227.2|3.5e-07,zf-RING_UBOX|PF13445.2|3.2e-06,zf-RING_UBOX|PF13445.2|12 R_Transcript_93351:10-264(-)
AATAACGATGCTGGTGATTTTGAGTGCAATATTTGTTTCGAATTACCCCAAGATCCAATTGTAACGCTATGTGGGCATCTATTTTGTTGGCCATGCCTATATAGGTGGCTTCATCACCACTCTCAGTCCCAAGAATGTCCTGTTTGTAAAGCCCTTATTCAGGAAGACAAATTAGTACCCCTCTATGGTTTCATGAAGAATATCATATCACCTTCCATACAAGTCTCATCTAATCTTTTCAAGTTTTATTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_93351.p1 GENE.R_Transcript_93351~~R_Transcript_93351.p1 ORF type:5prime_partial len:85 (-),score=1.98,zf-C3HC4_3|PF13920.2|3.4e-11,zf-C3HC4_2|PF13923.2|1e-09,zf-C3HC4|PF00097.21|1.5e-09,zf-RING_5|PF14634.2|5.7e-09,zf-RING_2|PF13639.2|2.5e-08,zf-C3HC4_4|PF15227.2|3.5e-07,zf-RING_UBOX|PF13445.2|3.2e-06,zf-RING_UBOX|PF13445.2|12 R_Transcript_93351:10-264(-)
NNDAGDFECNICFELPQDPIVTLCGHLFCWPCLYRWLHHHSQSQECPVCKALIQEDKLVPLYGFMKNIISPSIQVSSNLFKFYF*

Click here to download the sequence:
Link to NCBI Protein BLAST