Transcript Information: R_Transcript_93394.p1


Annotated TAIR IDAT5G15630.1
Annotated Gene NameCOBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
Annotated Gene Symbol(s)COBL4, IRX6
Annotation TypeOrtholog
Chromosome Positionchr5:5084842-5086545 | Forward length=431
E-Value6.2E-280
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.0210938667663
Replicate 28.5342930098579
Replicate 39.3637241443856
Condition 2: 8 Hour
Replicate 110.06578281896
Replicate 212.910439862116
Replicate 314.08531447679
Condition 3: 24 Hour
Replicate 119.246383426459
Replicate 215.229843899036
Replicate 315.164691468982


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_93394.p1 GENE.R_Transcript_93394~~R_Transcript_93394.p1 ORF type:complete len:433 (+),score=49.29,COBRA|PF04833.11|2e-70,COBRA|PF04833.11|4.8e+03 R_Transcript_93394:620-1918(+)
ATGAGGTTGCCTATTTTATCATTGTGCTTTGTGGCAATTCTCTCTTATGCAGCTGCGTATGATCCCCTAGATCCAACCGGAAACGTTACAATCAAATGGGATGTTATGCAATGGACCCCTGACGGCTATGTGGCAACAGTGACAGTAAACAACTTCCAAATTTATCGGCACATAGGAAGCCCAGGATGGCAAATGGGCTGGACATGGGCCAAGAAGGAAGTGATATGGTCAATGGCGGGGGCCCAAACAACAGAGCAAGGGGACTGCTCCAAGTTCAAAGGCAACATCCCACATTGCTGCAAGAAGACCCCAACAGTTGTGGATCTCCTGCCAGGGGTGCCTTACAACCAACAGTTCTCCAACTGCTGCAGGGGAGGGGTGCTCTCAGCTTGGGGTCAGGACCAATCAGCCTCAGTGGCTCAATTCCAGATAAGTGTCGGTCAGGCCGGGACCTCGAACAAGACTGTTAGGGTGCCCAAGAACTTCACCTTGTTGGGCCCTGGCCCTGGCTACACCTGTGGCCCTGCTAAGGTTGTGCCCTCCACCAATTTCCTCACCCCTGATCATCGTCGCAAAACTCAGGCCTTGATGACATGGAATGTGACCTGCACCTACTCACAGTTCCTGGCGAGGAAGAACCCTTCTTGCTGTGTCTCCTTGTCAACTTTCTACAATGACACTATTACCCCATGCCCTACCTGCGCTTGTGGATGTGATACTCGAAGGAATTGTGTCAAGAGTGACTCGAAAATTCTGAGCATGGTTGGGTTGAACACCCCGAAGAGAGATAACTCCCCTTTGCTTCATTGCACCCATCATATGTGCCCAGTTCGAGTGCATTGGCATGTCAAGGTAAACTACAAAGACTACTGGCGCGTCAAGGTCACCATCACAAACTTTAACTACCGGTTGAACTTCAGCCAGTGGACTCTCGCTGTTCAACACCCTAATCTGAACAATGTCACTCAAGTCTTCAGCTTCAACTATAAGCCTCTTGTTCCTTATGAATCAATCAATGACACAGGGATGTTTTATGGCATGAAGTACTACAATGACATGCTGATGGAAGCCGGGCCATTCGGAAATGTACAGTCAGAGATATTGATGCAGAAGGACGAGAATACCTTCACCTTCAAGCAAGGATGGGCATTCCCTCGAAAGGTTTACTTCAATGGCGATGAGTGCATGCTGCCTCCACCTGATAGCTATCCTTTCCTACCCAGTTCTGCCCTTAAACCTTCAATCACACTGCTAACTGTTGTGTGTTCTCTGATGCTGATATTCTTCACCTTGCCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_93394.p1 GENE.R_Transcript_93394~~R_Transcript_93394.p1 ORF type:complete len:433 (+),score=49.29,COBRA|PF04833.11|2e-70,COBRA|PF04833.11|4.8e+03 R_Transcript_93394:620-1918(+)
MRLPILSLCFVAILSYAAAYDPLDPTGNVTIKWDVMQWTPDGYVATVTVNNFQIYRHIGSPGWQMGWTWAKKEVIWSMAGAQTTEQGDCSKFKGNIPHCCKKTPTVVDLLPGVPYNQQFSNCCRGGVLSAWGQDQSASVAQFQISVGQAGTSNKTVRVPKNFTLLGPGPGYTCGPAKVVPSTNFLTPDHRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSTFYNDTITPCPTCACGCDTRRNCVKSDSKILSMVGLNTPKRDNSPLLHCTHHMCPVRVHWHVKVNYKDYWRVKVTITNFNYRLNFSQWTLAVQHPNLNNVTQVFSFNYKPLVPYESINDTGMFYGMKYYNDMLMEAGPFGNVQSEILMQKDENTFTFKQGWAFPRKVYFNGDECMLPPPDSYPFLPSSALKPSITLLTVVCSLMLIFFTLP*

Click here to download the sequence:
Link to NCBI Protein BLAST