Transcript Information: R_Transcript_93400.p1


Annotated TAIR IDAT5G60920.1
Annotated Gene NameCOBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
Annotated Gene Symbol(s)COB
Annotation TypeOrtholog
Chromosome Positionchr5:24511466-24513932 | Reverse length=456
E-Value1.5E-273
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3171668868094
Replicate 22.8299361430663
Replicate 34.4319557522991
Condition 2: 8 Hour
Replicate 13.7261098832764
Replicate 24.7638400444265
Replicate 36.1163035786087
Condition 3: 24 Hour
Replicate 14.6414697221228
Replicate 24.0754282732588
Replicate 35.6146720718563


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_93400.p1 GENE.R_Transcript_93400~~R_Transcript_93400.p1 ORF type:complete len:460 (+),score=47.75,COBRA|PF04833.11|1.4e-74,COBRA|PF04833.11|8.5e+03 R_Transcript_93400:955-2334(+)
ATGGGTATCACCTTCATTCCCATGATCAGATTAGCCTCCAATTTGAGCATTTTCAGTGTTGTTTATCTCTTCTTTCTGTTTTGTTCTAGCTTCACTCTTACAGAGGCCTATGATCCTCTCGATCCAAATGGGAACATCACCATTAAGTGGGATATCATGACCTGGACTCCTGATGGTTATGTTGCTGTAGTTACCATTAACAACTACCAAAAATACCGTCACATTCAAGCGCCAGGATGGCAACTGGGATGGACATGGGCCAAAAAGGAGATTATATGGAGCATGGTGGGAGGGCAAGCAACTGAACAAGGGGATTGTTCAAAGTTTAAAGGAAATATTCCGCATTGCTGTAAGAGGGACCCAACCATTGTAGACTTGATGCCGGGAACCCCTTACAACCAGCAGATTGCTAACTGTTGTAGGGGAGGAGTGCTCAGTTCCTGGGTTCAGGATCCTGCCACTTCAGTTAGTGCTTTTCAGATTAGTGTTGGTCAAGCAGGCACCACCAATAGAACTGTCAAAGTGCCGAAGAACTTCACCCTTAAGGCACCTGGACCTGGTTACACTTGTGGACCTGGAAAGATTGTTAAGCCCAGTCAATTTAAGACAAAAGATGGGAGGCGAACAACCCAAGCTCTGATGACTTGGAATGTGACATGCACCTATTCTCAGTTCCTGTCTCAGAAAACTCCAACATGTTGTGTCTCACTTTCATCCTTCTACAATGATACTATTGTACCCTGCCCAACATGCAGCTGTGGCTGCCAAAATAACATTACTCAGCCAGGAAGCTGTGTGGAGGCAAACTCGCCGTATCTGGCTTCAGTCGTTTCTGGTTCACATACTAACAAAAACAGTTACTTGTCACCTCTGGTCCAGTGCACCAGACATATGTGCCCAATCCGTGTTCACTGGCATGTAAAACTCAATTACAAGGATTATTGGCGTGTGAAGGTTACCATTACTAACTTCAACTACAGGATGAACTACTCGGAGTGGAATTTGGTTGTACAACATCCTAACTTTGACAACTTGACTCAGATATTCAGCTTCAATTATGAACCAATAACTCCATACTCTAATATAAATGATACTGCCATGATGTGGGGAATCAAGTTTTACAATGATCTACTTATGCAAGCTGGTCCGCAGGGCAATGTACAGTCGGAGTTACTCTTCCAGAAGGACAAGTCTACTTTCACATTTGATAAGGGCTGGGCTTTCCCGCGCAGGATCTACTTCAACGGGGATAATTGTGTCATGCCCCCTCCAGATTCCTACCCATGGTTGCCAAACGCAAGTTCTCAGCATAGTCAATCCCTGCTAATTATAACAGTGACATTGTTGTCAGCTTTGACATTCTTATTTGTTCATCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_93400.p1 GENE.R_Transcript_93400~~R_Transcript_93400.p1 ORF type:complete len:460 (+),score=47.75,COBRA|PF04833.11|1.4e-74,COBRA|PF04833.11|8.5e+03 R_Transcript_93400:955-2334(+)
MGITFIPMIRLASNLSIFSVVYLFFLFCSSFTLTEAYDPLDPNGNITIKWDIMTWTPDGYVAVVTINNYQKYRHIQAPGWQLGWTWAKKEIIWSMVGGQATEQGDCSKFKGNIPHCCKRDPTIVDLMPGTPYNQQIANCCRGGVLSSWVQDPATSVSAFQISVGQAGTTNRTVKVPKNFTLKAPGPGYTCGPGKIVKPSQFKTKDGRRTTQALMTWNVTCTYSQFLSQKTPTCCVSLSSFYNDTIVPCPTCSCGCQNNITQPGSCVEANSPYLASVVSGSHTNKNSYLSPLVQCTRHMCPIRVHWHVKLNYKDYWRVKVTITNFNYRMNYSEWNLVVQHPNFDNLTQIFSFNYEPITPYSNINDTAMMWGIKFYNDLLMQAGPQGNVQSELLFQKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDSYPWLPNASSQHSQSLLIITVTLLSALTFLFVHP*

Click here to download the sequence:
Link to NCBI Protein BLAST