Transcript Information: R_Transcript_93427.p1


Annotated TAIR IDAT2G01390.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:172256-174137 | Forward length=577
E-Value1.5E-180
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.3100455239753
Replicate 23.3636568963715
Replicate 34.4036561314694
Condition 2: 8 Hour
Replicate 14.0878594094052
Replicate 25.3545450614643
Replicate 36.8565949055087
Condition 3: 24 Hour
Replicate 15.032908835753
Replicate 25.5045165527916
Replicate 36.7176429224542


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_93427.p1 GENE.R_Transcript_93427~~R_Transcript_93427.p1 ORF type:complete len:593 (+),score=91.24,PPR_2|PF13041.2|2.4e+03,PPR_2|PF13041.2|0.023,PPR_2|PF13041.2|6.4e-11,PPR_2|PF13041.2|5.3e-09,PPR_2|PF13041.2|2e-11,PPR_2|PF13041.2|5e-10,PPR_2|PF13041.2|1.5e+04,PPR_2|PF13041.2|3.9e+03,PPR_2|PF13041.2|3.1,PPR_2|PF13041.2|1.2e+02,PPR_2|PF13041.2|7.7e-09,PPR|PF01535.16|0.0002,PPR|PF01535.16|5.4e-05,PPR|PF01535.16|0.0048,PPR|PF01535.16|0.00035,PPR|PF01535.16|62,PPR|PF01535.16|2.7e+02,PPR|PF01535.16|1,PPR|PF01535.16|5.1,PPR|PF01535.16|0.00013,PPR|PF01535.16|0.17,PPR_3|PF13812.2|0.0059,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.028,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|5.4,PPR_3|PF13812.2|16,PPR_3|PF13812.2|23,PPR_3|PF13812.2|0.017,PPR_3|PF13812.2|4.1e+02,PPR_1|PF12854.3|0.36,PPR_1|PF12854.3|5.5e-05,PPR_1|PF12854.3|1.7,PPR_1|PF12854.3|0.0034,PPR_1|PF12854.3|3.3e+02,PPR_1|PF12854.3|6.2e+02,PPR_1|PF12854.3|2.8e+02,PPR_1|PF12854.3|0.99,PPR_1|PF12854.3|6.2,TPR_14|PF13428.2|2.4e+03,TPR_14|PF13428.2|2.1e+02,TPR_14|PF13428.2|85,TPR_14|PF13428.2|7.8e+02,TPR_14|PF13428.2|2.7e+02,TPR_14|PF13428.2|58,TPR_14|PF13428.2|38 R_Transcript_93427:909-2687(+)
ATGTCCCTATGGTTGGCAACTAGAAGAATTTTCAGAATTTTACCGGGTTTCAAGCATATTTATGATTATTATTGGCATTGTGCAAGCTCAAAAAAATACACTAGATATGTGTATTCTGTTTCTCAACAGGGTTATAGAAACTTCTCTCAATCCACCCTTAAAGAGGGAAGCAGAAGGGTGAAACATTTATCTAAGAAAAATGTAGACCCAAAAGTATACATGAGAGAGATTGTTAGAGAAATATCAAATATTTTGAGGTACTCTTCATGGGATTCTGCACGAGAACAGCTGGAGAGGGTACATGTGAAATGGGACTCCTATACTGTCAATCAAGTTTTGAAAACCCACCCCCCAGTGGAAAAGGCCTGGTTGTTTTTCAATTGGGTTTCCAAGCTGAAGGGCTTTAAGCATGACCAATTTACTTATACAACCATGTTGAGTATCTTTGGAGAGGCACGAAGAGTAGATTCTATGAAGTTTGTCTTTCACCAGATGCAAGAGAATGGGATAAAGATTAATGCTGTTACTTACACTGTGCTTCTCCATTGGCTTTCAAATAATGGTGACTTTCATGGGGCAGTGAAGGTATGGGAGAAGATGAAAGCTAAGTGCTGTCATCCAACTGTTGTTTCTTATACGGCCTACATGAAGATTTTATTTGATAATGACAGAGCTCAGGAGGCCGTCGATATCTACAAAGAAATGTTGCAATCTGGAATGTCGCCTACTTGTCATACTTATACAATCTTAATGGAGCATCTTATCCGTTCTGGCAAATGCACATCAGCTCTTGAAGTTTTTGAAAAAATGCAAGAGACTGGGGTACAAGCTGACAAGGCAACATGCAATATTCTGGTAGAGCAATTTAGCAACGCAGGGGAGGCGTGTGGAATTATCCAAATTCTTCAGTACATGAAGGAACATTCCCTTGTTCTTCGTTACCCTGTTTTTGTTAAGGCACATAAAACGCTGAAAATGGCTGGTGAGAATGATGCACTTCTTCGACAAGTTAATCCACATATCCGATTTGAAGGCCCCAGTGAGAGTGAGGTTGTGGAGTTTGATGAGTCTGCTTCTCTAGATAACAATACCACAGACAGGGGACTCATAATAGAATTTCTAAGGAAGAAAAATTTTGTTGCCATTGATCATTTACTTGATGGGATGGCAGACCAGAATGTTTCACTAGATTCTGAGATTGTCTCAAATATTATTGTGGCAAATTGTGCTCATGGCAGGATGGATGCTGCTCTGCTGGCCTTACATTATAGTATTGATCAGGGTATTCACATTGAACAAGTAGCCTATCTTTCTCTACTGGGGGTCCTGATGAGAGCAAACGAGTTTTCAAAGATCTTGCAGATAGTAGAGCAAATGGTTAAGATTGGATTGTATCTCGAATCACAATTGGCTTCCGCTTTGATTTATAGGCTTGGCCAGGCCAGAGATCTTGGCAAGGCTATAAAATTATTTAACTTATTGCTTGAGGAGGCAAAAAGCACCACTGTATACACTGCTCTAATTGATGCTTGTTTTGCATCTGGAGATCCAGATAAGGCAATTGTAAAATTCAATGGCATGAAAAACAGGGGGATTCATATTGCTTCAGGAACATACAATGTGCTCTTAAGAGGTCTTGAAGTATGTGGCAGAGTTGATGAAGCAAAATTCTACAGGAAGGAAAAGAAATGTTTCCAGAGGGAATGGCATGTGTCACAGACTATTTTAATTGAGGAAAAGACCTGTGATCTCTTATTCGCAGGGTACATGGTATCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_93427.p1 GENE.R_Transcript_93427~~R_Transcript_93427.p1 ORF type:complete len:593 (+),score=91.24,PPR_2|PF13041.2|2.4e+03,PPR_2|PF13041.2|0.023,PPR_2|PF13041.2|6.4e-11,PPR_2|PF13041.2|5.3e-09,PPR_2|PF13041.2|2e-11,PPR_2|PF13041.2|5e-10,PPR_2|PF13041.2|1.5e+04,PPR_2|PF13041.2|3.9e+03,PPR_2|PF13041.2|3.1,PPR_2|PF13041.2|1.2e+02,PPR_2|PF13041.2|7.7e-09,PPR|PF01535.16|0.0002,PPR|PF01535.16|5.4e-05,PPR|PF01535.16|0.0048,PPR|PF01535.16|0.00035,PPR|PF01535.16|62,PPR|PF01535.16|2.7e+02,PPR|PF01535.16|1,PPR|PF01535.16|5.1,PPR|PF01535.16|0.00013,PPR|PF01535.16|0.17,PPR_3|PF13812.2|0.0059,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.028,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|5.4,PPR_3|PF13812.2|16,PPR_3|PF13812.2|23,PPR_3|PF13812.2|0.017,PPR_3|PF13812.2|4.1e+02,PPR_1|PF12854.3|0.36,PPR_1|PF12854.3|5.5e-05,PPR_1|PF12854.3|1.7,PPR_1|PF12854.3|0.0034,PPR_1|PF12854.3|3.3e+02,PPR_1|PF12854.3|6.2e+02,PPR_1|PF12854.3|2.8e+02,PPR_1|PF12854.3|0.99,PPR_1|PF12854.3|6.2,TPR_14|PF13428.2|2.4e+03,TPR_14|PF13428.2|2.1e+02,TPR_14|PF13428.2|85,TPR_14|PF13428.2|7.8e+02,TPR_14|PF13428.2|2.7e+02,TPR_14|PF13428.2|58,TPR_14|PF13428.2|38 R_Transcript_93427:909-2687(+)
MSLWLATRRIFRILPGFKHIYDYYWHCASSKKYTRYVYSVSQQGYRNFSQSTLKEGSRRVKHLSKKNVDPKVYMREIVREISNILRYSSWDSAREQLERVHVKWDSYTVNQVLKTHPPVEKAWLFFNWVSKLKGFKHDQFTYTTMLSIFGEARRVDSMKFVFHQMQENGIKINAVTYTVLLHWLSNNGDFHGAVKVWEKMKAKCCHPTVVSYTAYMKILFDNDRAQEAVDIYKEMLQSGMSPTCHTYTILMEHLIRSGKCTSALEVFEKMQETGVQADKATCNILVEQFSNAGEACGIIQILQYMKEHSLVLRYPVFVKAHKTLKMAGENDALLRQVNPHIRFEGPSESEVVEFDESASLDNNTTDRGLIIEFLRKKNFVAIDHLLDGMADQNVSLDSEIVSNIIVANCAHGRMDAALLALHYSIDQGIHIEQVAYLSLLGVLMRANEFSKILQIVEQMVKIGLYLESQLASALIYRLGQARDLGKAIKLFNLLLEEAKSTTVYTALIDACFASGDPDKAIVKFNGMKNRGIHIASGTYNVLLRGLEVCGRVDEAKFYRKEKKCFQREWHVSQTILIEEKTCDLLFAGYMVS*

Click here to download the sequence:
Link to NCBI Protein BLAST