Transcript Information: R_Transcript_93434.p1


Annotated TAIR IDAT3G54420.1
Annotated Gene NameHomolog of carrot EP3-3 chitinase
Annotated Gene Symbol(s)ATEP3, ATCHITIV, CHIV, EP3
Annotation TypeOrtholog
Chromosome Positionchr3:20145935-20147034 | Forward length=273
E-Value1.8E-135
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1157.77195705224
Replicate 2193.31866419661
Replicate 3178.83914770523
Condition 2: 8 Hour
Replicate 1748.02091426112
Replicate 2842.72065237108
Replicate 3834.51204754019
Condition 3: 24 Hour
Replicate 1280.83659459635
Replicate 2253.11417112241
Replicate 3335.55841076349


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_93434.p1 GENE.R_Transcript_93434~~R_Transcript_93434.p1 ORF type:5prime_partial len:275 (+),score=35.17,Glyco_hydro_19|PF00182.15|1.2e+04,Glyco_hydro_19|PF00182.15|6.3e-44,Glyco_hydro_19|PF00182.15|5.4e-08,Chitin_bind_1|PF00187.15|2.1e-07,Chitin_bind_1|PF00187.15|5e+02,Chitin_bind_1|PF00187.15|1.4e+04 R_Transcript_93434:2-826(+)
AAACCAAACACCATGGCTAGGCTACTAAGTATAATCCCAATAATACTTTTGGCAGTAATCCCAATAGTAGTAGTGGCTCAGAACTGTGGGTGTGAAGAAGGCTACTGTTGTAGCAAATGGGGATACTGTGGCACCACAGCTGCTTACTGTGGCGACGGGTGCAAAGAAGGTCCTTGCTATACTAGCACTCCCAGTAGTGGAAGTGGTGTGTCGGTGCCTGATTTGGTGACTGATGGCTTCTTTGATGGGATCATAGACCAAGCTGCTTCTACTTGTGCTGGTAAAAACTTCTACTCAAGGTCTGCTTTTTTGGATGCTCTCAGTCATTACCCTCAGTTTGGTACTGTTGGCTCCGCTGATGATTCTAAGCGTGAGGTTGCTGCCTTCTTTGCTCATCTCACCCATGAAACTGGACACTTTTGTTACACAGAAGAGATAAACGGGGCATCAAGGGACTACTGTCAAGAGAGCAACACACAATACCCATGCAACCCAAACAAGAAATACTACGGAAGGGGACCAATTCAGATCACTTGGAACTACAACTACGGTCCAGCAGGAGACAGCATTGGGTTCGATGGCTTGAACCAACCCGAGACTGTGGCTAACGACCCTGTCGTCTCCTTCAGGACCGCGTTCTGGTTTTGGATGAACAATGTCCACTCTCGTATAACATCAGGTCAAGGGTTCGGATCCACCATCCGTGCCATCAATGGCGGGGAATGTGGTGGTGGTAACACGGCTGCTGTTAATGCCCGTGTTCAGTACTATACTCAGTATTGTCAGCAGATTGGAGTTTCTCCTGGGGATAACCTTACTTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_93434.p1 GENE.R_Transcript_93434~~R_Transcript_93434.p1 ORF type:5prime_partial len:275 (+),score=35.17,Glyco_hydro_19|PF00182.15|1.2e+04,Glyco_hydro_19|PF00182.15|6.3e-44,Glyco_hydro_19|PF00182.15|5.4e-08,Chitin_bind_1|PF00187.15|2.1e-07,Chitin_bind_1|PF00187.15|5e+02,Chitin_bind_1|PF00187.15|1.4e+04 R_Transcript_93434:2-826(+)
KPNTMARLLSIIPIILLAVIPIVVVAQNCGCEEGYCCSKWGYCGTTAAYCGDGCKEGPCYTSTPSSGSGVSVPDLVTDGFFDGIIDQAASTCAGKNFYSRSAFLDALSHYPQFGTVGSADDSKREVAAFFAHLTHETGHFCYTEEINGASRDYCQESNTQYPCNPNKKYYGRGPIQITWNYNYGPAGDSIGFDGLNQPETVANDPVVSFRTAFWFWMNNVHSRITSGQGFGSTIRAINGGECGGGNTAAVNARVQYYTQYCQQIGVSPGDNLTC*

Click here to download the sequence:
Link to NCBI Protein BLAST