Transcript Information: R_Transcript_93611.p1


Annotated TAIR IDAT2G27030.3
Annotated Gene Namecalmodulin 5
Annotated Gene Symbol(s)CAM5
Annotation TypeOrtholog
Chromosome Positionchr2:11532069-11534176 | Forward length=181
E-Value2.4E-106
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1852.84047354388
Replicate 2940.03117342543
Replicate 3917.36610298634
Condition 2: 8 Hour
Replicate 1646.53102977726
Replicate 2635.26313783921
Replicate 3654.61659577779
Condition 3: 24 Hour
Replicate 1889.49291407764
Replicate 2926.20355819738
Replicate 3789.58730418371


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_93611.p1 GENE.R_Transcript_93611~~R_Transcript_93611.p1 ORF type:complete len:188 (+),score=56.47,EF-hand_1|PF00036.28|3.4e-09,EF-hand_1|PF00036.28|2.4e-08,EF-hand_1|PF00036.28|2.9e-09,EF-hand_1|PF00036.28|4.7e-10,EF-hand_7|PF13499.2|2.3e-14,EF-hand_7|PF13499.2|5.2e-19,EF-hand_8|PF13833.2|2.8,EF-hand_8|PF13833.2|1.9e-13,EF-hand_8|PF13833.2|0.44,EF-hand_8|PF13833.2|1.1e-14,EF-hand_6|PF13405.2|1.6e-09,EF-hand_6|PF13405.2|0.014,EF-hand_6|PF13405.2|3.6e-08,EF-hand_6|PF13405.2|0.0016,EF-hand_5|PF13202.2|0.00014,EF-hand_5|PF13202.2|0.00011,EF-hand_5|PF13202.2|2.8e-06,EF-hand_5|PF13202.2|0.00013,EF-hand_9|PF14658.2|2.8e-08,EF-hand_9|PF14658.2|4e-05,EF-hand_4|PF12763.3|0.11,EF-hand_4|PF12763.3|6.2e-05,SPARC_Ca_bdg|PF10591.5|0.069,SPARC_Ca_bdg|PF10591.5|0.002,SPARC_Ca_bdg|PF10591.5|1.2e+03,EF-hand_11|PF08976.7|78,EF-hand_11|PF08976.7|0.00037 R_Transcript_93611:264-827(+)
ATGGCCGATCAGCTCAGCGATGATCAGATCTCTGAATTTAAGGAAGCCTTCAGTCTTTTTGACAAGGATGGCGATGGTTGTATCACCACCAAGGAGCTTGGAACAGTGATGCGTTCACTTGGACAAAACCCAACTGAAGCAGAGCTCCAGGACATGATAAATGAAGTGGATGCTGATGGAAATGGAACTATCGATTTCCCAGAGTTCCTCAACCTGATGGCCAGGAAGATGAAGGATACCGACTCAGAGGAGGAGCTGAAGGAAGCTTTCAGAGTTTTCGACAAGGATCAAAACGGTTTCATCTCTGCAGCTGAGCTTCGCCATGTCATGACAAACCTTGGTGAGAAGCTGACCGACGAAGAAGTTGATGAGATGATCCGTGAAGCTGACGTAGATGGTGATGGCCAGATCAACTACGAGGAGTTTGTCAAGGTTATGATGGCCAAGAAGAGAGAGAGATTTCAGGAACATGGACATCATCCAAGAAAGGAAAGGCGAAGGCGAAAGGCCAACTCAAGTTGGAGGACGCGATGTAAATCATGGTTTTGTTCCAACAAAGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_93611.p1 GENE.R_Transcript_93611~~R_Transcript_93611.p1 ORF type:complete len:188 (+),score=56.47,EF-hand_1|PF00036.28|3.4e-09,EF-hand_1|PF00036.28|2.4e-08,EF-hand_1|PF00036.28|2.9e-09,EF-hand_1|PF00036.28|4.7e-10,EF-hand_7|PF13499.2|2.3e-14,EF-hand_7|PF13499.2|5.2e-19,EF-hand_8|PF13833.2|2.8,EF-hand_8|PF13833.2|1.9e-13,EF-hand_8|PF13833.2|0.44,EF-hand_8|PF13833.2|1.1e-14,EF-hand_6|PF13405.2|1.6e-09,EF-hand_6|PF13405.2|0.014,EF-hand_6|PF13405.2|3.6e-08,EF-hand_6|PF13405.2|0.0016,EF-hand_5|PF13202.2|0.00014,EF-hand_5|PF13202.2|0.00011,EF-hand_5|PF13202.2|2.8e-06,EF-hand_5|PF13202.2|0.00013,EF-hand_9|PF14658.2|2.8e-08,EF-hand_9|PF14658.2|4e-05,EF-hand_4|PF12763.3|0.11,EF-hand_4|PF12763.3|6.2e-05,SPARC_Ca_bdg|PF10591.5|0.069,SPARC_Ca_bdg|PF10591.5|0.002,SPARC_Ca_bdg|PF10591.5|1.2e+03,EF-hand_11|PF08976.7|78,EF-hand_11|PF08976.7|0.00037 R_Transcript_93611:264-827(+)
MADQLSDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAKKRERFQEHGHHPRKERRRRKANSSWRTRCKSWFCSNKV*

Click here to download the sequence:
Link to NCBI Protein BLAST