Transcript Information: R_Transcript_93635.p1


Annotated TAIR IDAT1G56090.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20977989-20979185 | Reverse length=272
E-Value8.2E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1968486866689
Replicate 22.7586380109005
Replicate 34.4308653014455
Condition 2: 8 Hour
Replicate 13.6639432950257
Replicate 24.7333253532437
Replicate 36.8234156711674
Condition 3: 24 Hour
Replicate 15.7813456157357
Replicate 24.4271505072327
Replicate 35.7515136403526


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_93635.p1 GENE.R_Transcript_93635~~R_Transcript_93635.p1 ORF type:complete len:274 (+),score=74.45,TPR_11|PF13414.2|3.3e-10,TPR_11|PF13414.2|0.026,TPR_2|PF07719.13|0.14,TPR_2|PF07719.13|0.043,TPR_2|PF07719.13|0.088,TPR_1|PF00515.24|13,TPR_1|PF00515.24|0.00062,TPR_1|PF00515.24|0.48,TPR_19|PF14559.2|0.0067,TPR_19|PF14559.2|0.00036 R_Transcript_93635:308-1129(+)
ATGGCGACTATGGCGTTGTGTAAAGTAGAGAGAGCTCACCAGATGTACCGTGATGGTCGATATAATGAAGCCCTAGGGTTTTACACTGATGCTCTTTCTATGGCCAAGACTAAAGCTCAGAGGATCGCTCTTCATAGCAATCGTGCTGCTTGTTTTCTCAAATTGCATGATTTCAACAAGGCAGCTGATGAATGTACATCTGTTCTTGAGCTTGATCATAAGCACACTGGAGCAATAATGTTGCGTGCTCAAACTCTGGTCACACTAAAGGAGTATCAATCAGCGCTCTTTGATGTCAATCGGCTCCTGGAGTTGAATCCATCATCAGAAGTATACCTAAACCTTCAAGCACGTTTAAAAACACAATTGTCACTTCCTCCAATACCCGAGGCAGAGACTGAGCTTGAAGAAACAGATGATGACACAAGTGAAAGGGGTGAAGACACAAGTGAAAGGGTTGAGGAATTGGAGAACTATAGAGGAGGGGGAGAAGAAGAAAACAATAGTGTGGCAGGTTTGGTTGTGGAAGAAAATAGCACCGTGGTAGGTTCTGTTGAAAGATCCGAACCTAAAATTCCTACTTCTAGTGGATTCCTTCCTCCTCAATCCATTGGAACCCAACAGTTTTCTGATTCTCATTCGAATGGATGGCAAGCAATCCCAAAACCAAAGGGACACTCTAGTCTTGACTACTCACGCTGGGATGCAGTTGCAGATGGCTCTAGTGAAGATGATGATGATGAAGAAGACGACGATGATGAAGAAACCCGGCCTCAATACAAGTTTCGCGTGAAAACTGTTGACCTCAGACCCGTCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_93635.p1 GENE.R_Transcript_93635~~R_Transcript_93635.p1 ORF type:complete len:274 (+),score=74.45,TPR_11|PF13414.2|3.3e-10,TPR_11|PF13414.2|0.026,TPR_2|PF07719.13|0.14,TPR_2|PF07719.13|0.043,TPR_2|PF07719.13|0.088,TPR_1|PF00515.24|13,TPR_1|PF00515.24|0.00062,TPR_1|PF00515.24|0.48,TPR_19|PF14559.2|0.0067,TPR_19|PF14559.2|0.00036 R_Transcript_93635:308-1129(+)
MATMALCKVERAHQMYRDGRYNEALGFYTDALSMAKTKAQRIALHSNRAACFLKLHDFNKAADECTSVLELDHKHTGAIMLRAQTLVTLKEYQSALFDVNRLLELNPSSEVYLNLQARLKTQLSLPPIPEAETELEETDDDTSERGEDTSERVEELENYRGGGEEENNSVAGLVVEENSTVVGSVERSEPKIPTSSGFLPPQSIGTQQFSDSHSNGWQAIPKPKGHSSLDYSRWDAVADGSSEDDDDEEDDDDEETRPQYKFRVKTVDLRPVK*

Click here to download the sequence:
Link to NCBI Protein BLAST