Transcript Information: R_Transcript_93700.p1


Annotated TAIR IDAT3G56190.1
Annotated Gene Namealpha-soluble NSF attachment protein 2
Annotated Gene Symbol(s)ALPHA-SNAP2, ASNAP
Annotation TypeOrtholog
Chromosome Positionchr3:20846119-20848356 | Reverse length=289
E-Value6.6E-116
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.193931978985
Replicate 24.0968391056191
Replicate 36.890644642745
Condition 2: 8 Hour
Replicate 16.0716982186258
Replicate 212.907500900197
Replicate 311.068055256333
Condition 3: 24 Hour
Replicate 12.8930570083692
Replicate 22.1517325746905
Replicate 34.0038484183349


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_93700.p1 GENE.R_Transcript_93700~~R_Transcript_93700.p1 ORF type:5prime_partial len:246 (+),score=62.21,SNAP|PF14938.2|2.2e-93,TPR_2|PF07719.13|15,TPR_2|PF07719.13|6.5e+02,TPR_2|PF07719.13|0.00029,TPR_2|PF07719.13|0.61,TPR_2|PF07719.13|4.7,TPR_12|PF13424.2|0.092,TPR_12|PF13424.2|7.2e-06,TPR_12|PF13424.2|0.0065,TPR_8|PF13181.2|12,TPR_8|PF13181.2|2.8e+03,TPR_8|PF13181.2|0.0036,TPR_8|PF13181.2|1.8,TPR_8|PF13181.2|66,TPR_11|PF13414.2|4.5,TPR_11|PF13414.2|0.00071,TPR_11|PF13414.2|0.052,TPR_11|PF13414.2|0.0071,TPR_1|PF00515.24|2e+02,TPR_1|PF00515.24|1.5e+03,TPR_1|PF00515.24|0.001,TPR_1|PF00515.24|3.1,TPR_1|PF00515.24|51,TPR_16|PF13432.2|12,TPR_16|PF13432.2|0.1,TPR_16|PF13432.2|1.1,TPR_14|PF13428.2|6.7e+03,TPR_14|PF13428.2|0.043,TPR_14|PF13428.2|59,TPR_14|PF13428.2|35,TPR_6|PF13174.2|30,TPR_6|PF13174.2|4.5e+02,TPR_6|PF13174.2|0.83,TPR_6|PF13174.2|0.89,TPR_6|PF13174.2|1.3e+03,TPR_6|PF13174.2|1.2e+04,TPR_6|PF13174.2|1.1e+04 R_Transcript_93700:3-740(+)
AAACTCGCCAAATCATGGGATCAAGCTGGTTCTTCTTACATCAAACTGGCCGAGTGTCATTTGAAGCTTGATAGCAAGCATGAAGCTGCTTCTGCTTATGTGGATGCTGCAAACTCTTACAAGAAGATATCTCCTATACAGGCCATATCATGTCTACATCAAGCTGTGAATCTCTATTCTGGTATTGGGAGATTTAGCATTGCTGCAAGATATTCCAAGGAAACGGGTGAATTATACGAGCAACAGCGTAATTTTGAGGAGGCTATGAAATATTTTGAACAAGCTGCTGAGTTCTTCCAAAGCGAAGAAGCAACAACTTCCGCTAGTCAGTGCAAGCAGAAAGTTGCTCTAGTTTCTGCCCATTTGAAACAGTATCAGAAGGCGATTGAGATATTCGAACAAGTAGCACGAGAAGCTGTAAAAAGCAATTTGCTGAGGTATGGTGTTAGAGGTCATCTACTCAATTCTGGTATTTGCCATCTCTGTACTGGTGATCTTGTTGCAGCTTCCAATGCTCTGGAAAGATATCAGGATTTAGATCCCACATTTTCAAGAACTCGAGAGTATCAACTTTTCGCTGATTTGGTGGAATCATATGACGAGGAAGATGTTGAGAAGTTTACTGATGTGCTCAAGGAATATGATAGCTTAAGTCCACTGGATTCTTGGAAAACTGTTCTCCTATTAAGAGTAAAAGAGGCATTGAAGGCTAAGGAGCTCGACGATGACCTTACCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_93700.p1 GENE.R_Transcript_93700~~R_Transcript_93700.p1 ORF type:5prime_partial len:246 (+),score=62.21,SNAP|PF14938.2|2.2e-93,TPR_2|PF07719.13|15,TPR_2|PF07719.13|6.5e+02,TPR_2|PF07719.13|0.00029,TPR_2|PF07719.13|0.61,TPR_2|PF07719.13|4.7,TPR_12|PF13424.2|0.092,TPR_12|PF13424.2|7.2e-06,TPR_12|PF13424.2|0.0065,TPR_8|PF13181.2|12,TPR_8|PF13181.2|2.8e+03,TPR_8|PF13181.2|0.0036,TPR_8|PF13181.2|1.8,TPR_8|PF13181.2|66,TPR_11|PF13414.2|4.5,TPR_11|PF13414.2|0.00071,TPR_11|PF13414.2|0.052,TPR_11|PF13414.2|0.0071,TPR_1|PF00515.24|2e+02,TPR_1|PF00515.24|1.5e+03,TPR_1|PF00515.24|0.001,TPR_1|PF00515.24|3.1,TPR_1|PF00515.24|51,TPR_16|PF13432.2|12,TPR_16|PF13432.2|0.1,TPR_16|PF13432.2|1.1,TPR_14|PF13428.2|6.7e+03,TPR_14|PF13428.2|0.043,TPR_14|PF13428.2|59,TPR_14|PF13428.2|35,TPR_6|PF13174.2|30,TPR_6|PF13174.2|4.5e+02,TPR_6|PF13174.2|0.83,TPR_6|PF13174.2|0.89,TPR_6|PF13174.2|1.3e+03,TPR_6|PF13174.2|1.2e+04,TPR_6|PF13174.2|1.1e+04 R_Transcript_93700:3-740(+)
KLAKSWDQAGSSYIKLAECHLKLDSKHEAASAYVDAANSYKKISPIQAISCLHQAVNLYSGIGRFSIAARYSKETGELYEQQRNFEEAMKYFEQAAEFFQSEEATTSASQCKQKVALVSAHLKQYQKAIEIFEQVAREAVKSNLLRYGVRGHLLNSGICHLCTGDLVAASNALERYQDLDPTFSRTREYQLFADLVESYDEEDVEKFTDVLKEYDSLSPLDSWKTVLLLRVKEALKAKELDDDLT*

Click here to download the sequence:
Link to NCBI Protein BLAST