Transcript Information: R_Transcript_93707.p1


Annotated TAIR IDAT5G01530.1
Annotated Gene Namelight harvesting complex photosystem II
Annotated Gene Symbol(s)LHCB4.1
Annotation TypeOrtholog
Chromosome Positionchr5:209084-210243 | Forward length=290
E-Value5E-153
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.680027825949
Replicate 28.326119130601
Replicate 312.243256301392
Condition 2: 8 Hour
Replicate 116.042463241299
Replicate 28.3275008236139
Replicate 37.6361948127145
Condition 3: 24 Hour
Replicate 110.053936268684
Replicate 25.7799988816685
Replicate 36.9436856248088


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_93707.p1 GENE.R_Transcript_93707~~R_Transcript_93707.p1 ORF type:complete len:290 (+),score=75.42,Chloroa_b-bind|PF00504.17|2.2e-48 R_Transcript_93707:138-1007(+)
ATGGCCAGCGCCGCCCCCGCCACCGCCTCCTACATCTTCGGGACCCGCATTGCAGGCCTGAAGCCCGGCCCAGGGAGGGTGCAGGCCCTATTAAAATTTGGCAAGAAGAAAGAAGCTGCCCCATCAAAAAAGGCAGCTCCCAAGAAGCCAATAGTGGATGAGGACAGGCCAGTATGGTTCCCGGGTGCAGAACCACCAGAGTGGCTAGATGGTTCCATGGTTGGGGACCGTGGGTTCGACCCATTTGGGCTTGCAAAGCCAGCTGAGTACTTGCAGTTTGACTATGATGGGTTGGACCAGAACCTGGCTAAGAATGTGGCTGGTGACATCATAGGGACTAGGATTGAGACCCCAGATGTTCAGCCTACCCCTTTCCAGCCTTACACTGAGGTTTTTGGTATTCAGAGGTTTAGGGAGTGTGAGGTCATTCATGGCAGGTGGGCCATGCTTGCCACTCTTGGTGCTCTTTCTGTTGAGGCTCTCACTGGTGTCGCCTGGCAAGATGCTGGAAAGGTAGAGTTGATTGAAGGAGCATCATACCTAGGGCAGAAGCTCCCATTCTCACTGACAACATTGATCTGGATTGAGGTCCTGCTAGTGGGATACATTGAGTTCCAGAGAAATGCAGAGCTAGACCCCGAAAAGAGGATCTACCCAGGAGGCAAGTACTTTGATCCCCTTGGCTTGGCTGCTGATCCAGAGAAGAAGGAGAGGCTTCAATTGGCCGAGATCAAGCACTCCCGTCTTGCCATGGTTGCCTTCCTTGGCTTCGCCATCCAAGCTGCTGCTACCGAACAGGGTCCTCTTAGCAATGTTGCTGCCTTCTTGAGTGACCCCTCTAATAACATCATCAAGACTTTTTCTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_93707.p1 GENE.R_Transcript_93707~~R_Transcript_93707.p1 ORF type:complete len:290 (+),score=75.42,Chloroa_b-bind|PF00504.17|2.2e-48 R_Transcript_93707:138-1007(+)
MASAAPATASYIFGTRIAGLKPGPGRVQALLKFGKKKEAAPSKKAAPKKPIVDEDRPVWFPGAEPPEWLDGSMVGDRGFDPFGLAKPAEYLQFDYDGLDQNLAKNVAGDIIGTRIETPDVQPTPFQPYTEVFGIQRFRECEVIHGRWAMLATLGALSVEALTGVAWQDAGKVELIEGASYLGQKLPFSLTTLIWIEVLLVGYIEFQRNAELDPEKRIYPGGKYFDPLGLAADPEKKERLQLAEIKHSRLAMVAFLGFAIQAAATEQGPLSNVAAFLSDPSNNIIKTFSS*

Click here to download the sequence:
Link to NCBI Protein BLAST