Transcript Information: R_Transcript_93780.p1


Annotated TAIR IDAT1G19715.3
Annotated Gene NameMannose-binding lectin superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6816934-6819432 | Reverse length=601
E-Value2.1E-115
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 140.218388544296
Replicate 227.090565579503
Replicate 333.243888248653
Condition 2: 8 Hour
Replicate 138.233225563813
Replicate 249.127615401079
Replicate 345.417483353129
Condition 3: 24 Hour
Replicate 139.592489583371
Replicate 228.083073290756
Replicate 338.210738690685


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_93780.p1 GENE.R_Transcript_93780~~R_Transcript_93780.p1 ORF type:complete len:472 (+),score=64.32,Jacalin|PF01419.13|3e-26,Jacalin|PF01419.13|3.5e-30 R_Transcript_93780:42-1457(+)
ATGAGCTGGAACGAGGAAAAATTGAACGCACCTGGACCATGGGTTGGCCAAAATGGTTATGATGTAGCGAGTGATCACAAGAGCTGGAACGGGGACAAAGTGAACACAACTGGACCATGGGTAGGCCAAAATGGTTATGATGTAGCGAGTGATCACAAGAGCTGGAACGGAGACAAAGCGAACAACATAGCACCAGGACCATGGGTAGGCCGAAATGGTTATGATGACCTGAGTGACAACAAGAGCTGGAACAAGAACGATGTGAACCACATAGCAACCGGACCAGAACCATGGGTAGGCCAAAATGGTTATGATGTAATGAGTGACCATAAGGTGATCTCTCCTCATGTTAGTACAGTTTACCCGAGTAGCAAAACAGTACGGTCATGTGGACCATGGGGTGGTGATGGCGGAACAAGATTTGATGATGGGATCTACACAGGGGTGCGGGAAATACACATACAGCGTTCAGGAGGTTTGGTATCTATACGAGTTTGTTATGATCAATATGGCAAGGTTGTATGGGGAAGCAAAAATGGTGGAACTGCAGGCCTGAAGCTTGATAAGATTGTATTGGACTATCCCTTTGAAGTCCTGACTCATATAACTGGATACTATGGATCCACGATCCTGCGAGGGCCTACGATCATCAAATCCATTACATTTCACACCACAAAAAGGACTTATGGGCCGTTTGGAGATGAACAAGGTTTTTCCTTCTCTTCGGGCACAAAGGGTGCCATTGTTGGTTTTCATGGGAGACAAGGTTTTTTCATAAATAGCATTGGAGTTCATGTCCTCGAAAGCCATCCAGGGGTTCCTCAGTCCTCATACCTTGATCCATTCAACATGTCTGCCATGAAAAATCCTGAGGTAGCATGGGGTGTGCCACGAGAATTGGCTTCCTTCCATACAGGTCCATGGGGTGGTGAAGGAGGTATGCCCTGGGATGATGGAATTTATGCAGGGGTCAAGAAAATTCTTCTGACAAGGGGAGAAGCTATTTGCTCGATCCGAGTTGAGTATGATAGGAATGGCCGCTCTATGTGGGCTGAGCCACATGGAACAAGCAATAACACTTGCAGCTACTTAATCAAATTCGATCACCCATACGAAGTCCTAATAAGCTTGAGTGGATACTATGATAGCATGTATGGAGACAGGCAAAAAAGGATAATAAGATCTCTCACATTTCATACCAATAAAGGAAGGTATGGACCATATGGAAAAGAGATCGGAACATACTTTTCTTCTTCAAAGGCAGAGGGTCGGGTGATCGGCTTCTATGGAAGGAGTGGTTCTTTCTTGGATGCTATTGGAGTTCATATGCAGTACTGGTCGGCAAATGAAGCATCATATCATCCATATCCCACAGAAAAAGGAGCTATCAGGACTATCCTTAACAAGCTTCTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_93780.p1 GENE.R_Transcript_93780~~R_Transcript_93780.p1 ORF type:complete len:472 (+),score=64.32,Jacalin|PF01419.13|3e-26,Jacalin|PF01419.13|3.5e-30 R_Transcript_93780:42-1457(+)
MSWNEEKLNAPGPWVGQNGYDVASDHKSWNGDKVNTTGPWVGQNGYDVASDHKSWNGDKANNIAPGPWVGRNGYDDLSDNKSWNKNDVNHIATGPEPWVGQNGYDVMSDHKVISPHVSTVYPSSKTVRSCGPWGGDGGTRFDDGIYTGVREIHIQRSGGLVSIRVCYDQYGKVVWGSKNGGTAGLKLDKIVLDYPFEVLTHITGYYGSTILRGPTIIKSITFHTTKRTYGPFGDEQGFSFSSGTKGAIVGFHGRQGFFINSIGVHVLESHPGVPQSSYLDPFNMSAMKNPEVAWGVPRELASFHTGPWGGEGGMPWDDGIYAGVKKILLTRGEAICSIRVEYDRNGRSMWAEPHGTSNNTCSYLIKFDHPYEVLISLSGYYDSMYGDRQKRIIRSLTFHTNKGRYGPYGKEIGTYFSSSKAEGRVIGFYGRSGSFLDAIGVHMQYWSANEASYHPYPTEKGAIRTILNKLL*

Click here to download the sequence:
Link to NCBI Protein BLAST