Transcript Information: R_Transcript_93830.p1


Annotated TAIR IDAT1G36980.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0220 (InterPro:IPR007919); Has 424 Blast hits to 424 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 228; Fungi - 120; Plants - 62; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:14025084-14026727 | Forward length=135
E-Value3.4E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 198.512303976203
Replicate 266.076592486585
Replicate 385.394970303304
Condition 2: 8 Hour
Replicate 175.978198586305
Replicate 285.168652895104
Replicate 390.224182201335
Condition 3: 24 Hour
Replicate 178.326636423932
Replicate 273.787814670681
Replicate 385.619550686981


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_93830.p1 GENE.R_Transcript_93830~~R_Transcript_93830.p1 ORF type:complete len:136 (+),score=14.55,UPF0220|PF05255.7|3.1e-23 R_Transcript_93830:889-1296(+)
ATGGATGTATCGGAACTTTGGGCGATATTCGGGCCGGGTATCGCCGGTGCTGTATTCGGAGCAGGGTGGTGGTTTTGGGTTGACACCGTCGTTTGCAGTGCCGTTGCTATTTCCTTCGTCCATTATCTTCCTGGGATTTTTGCGTCTTTGGCGGCTTTGATGTTCAATTGTGTAAGAAAAGAGGATATCGATTACTCCCCTTACGATGAAGGCGAGTGGAGATTGAAGCTTTGGCTTTTCCTTGCATATGTCATTTCCTTTGTATCTCTTGCGGCATCAGTTGGGCTATTGATACAAGATGCATTGGTGCCTTCTGGTCCTTCAGCTTGGACAGGAACAGCTGGTGTTTTGCAGTGTGTGTTTGTACTGATCAGTGGACTAATCTATTGGACTTCACATTCGGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_93830.p1 GENE.R_Transcript_93830~~R_Transcript_93830.p1 ORF type:complete len:136 (+),score=14.55,UPF0220|PF05255.7|3.1e-23 R_Transcript_93830:889-1296(+)
MDVSELWAIFGPGIAGAVFGAGWWFWVDTVVCSAVAISFVHYLPGIFASLAALMFNCVRKEDIDYSPYDEGEWRLKLWLFLAYVISFVSLAASVGLLIQDALVPSGPSAWTGTAGVLQCVFVLISGLIYWTSHSE*

Click here to download the sequence:
Link to NCBI Protein BLAST