Transcript Information: R_Transcript_93835.p1


Annotated TAIR IDAT1G36980.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0220 (InterPro:IPR007919); Has 424 Blast hits to 424 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 228; Fungi - 120; Plants - 62; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:14025084-14026727 | Forward length=135
E-Value2.1E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6527155374773
Replicate 25.2147674236557
Replicate 34.1920826973351
Condition 2: 8 Hour
Replicate 14.8011499896559
Replicate 24.9690848535968
Replicate 33.9150532710639
Condition 3: 24 Hour
Replicate 13.6012246631693
Replicate 23.1713444156386
Replicate 33.1472516543251


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_93835.p1 GENE.R_Transcript_93835~~R_Transcript_93835.p1 ORF type:complete len:153 (+),score=21.04,UPF0220|PF05255.7|4.6e-19 R_Transcript_93835:889-1347(+)
ATGGATGTATCGGAACTTTGGGCGATATTCGGGCCGGGTATCGCCGGTGCTGTATTCGGAGCAGGGTGGTGGTTTTGGGTTGACACCGTCGTTTGCAGTGCCGTTGCTATTTCCTTCGTCCATTATCTTCCTGGGATTTTTGCGTCTTTGGCGGCTTTGATGTTCAATTGTGTAAGAAAAGAGGATATCGATTACTCCCCTTACGATGAAGGCGAGTGGAGATTGAAGCTTTGGCTTTTCCTTGCATATGTCATTTCCTTTGTATCTCTTGCGGCATCAGTTGGGCTATTGATACAAGATGCATTGGTGCCTTCTGGTCCTTCAGCTTGGACAGGAACAGCTGGTGTTTTGCAGTGTGTGTTTGTACTGATCAGAGTAAATGCTGGCTTTAACAAGAAATCATCGCCAAAGGCACACCTTTTGTTCATGGAGGTCAAGACTCAGGATTGTACAATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_93835.p1 GENE.R_Transcript_93835~~R_Transcript_93835.p1 ORF type:complete len:153 (+),score=21.04,UPF0220|PF05255.7|4.6e-19 R_Transcript_93835:889-1347(+)
MDVSELWAIFGPGIAGAVFGAGWWFWVDTVVCSAVAISFVHYLPGIFASLAALMFNCVRKEDIDYSPYDEGEWRLKLWLFLAYVISFVSLAASVGLLIQDALVPSGPSAWTGTAGVLQCVFVLIRVNAGFNKKSSPKAHLLFMEVKTQDCTI*

Click here to download the sequence:
Link to NCBI Protein BLAST