Transcript Information: R_Transcript_93853.p1


Annotated TAIR IDAT2G19870.1
Annotated Gene NametRNA/rRNA methyltransferase (SpoU) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:8576034-8577803 | Forward length=589
E-Value4.1E-162
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.4691776390058
Replicate 24.7473252779498
Replicate 35.4319285843817
Condition 2: 8 Hour
Replicate 14.5460888964554
Replicate 25.30248852484
Replicate 35.7057452501584
Condition 3: 24 Hour
Replicate 16.96330550105
Replicate 25.5138147226443
Replicate 37.1617857247568


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_93853.p1 GENE.R_Transcript_93853~~R_Transcript_93853.p1 ORF type:complete len:544 (+),score=144.55,SpoU_methylase|PF00588.15|6.1e-25,SpoU_methylase|PF00588.15|2.2,SpoU_sub_bind|PF08032.8|7e-14 R_Transcript_93853:304-1935(+)
ATGTACTCTAATTTATCAAAGTCTCAAGCTTTGCCTATGGCCTTGAGGGTCTCATCACAGCAGCCTAAGTTCTCAAAGCCATTTCAACCCTCAAAGTTCCAATCTTTCTCACATGGGACTTATCCAAAACCCTCCTTAAACCCTAACTCTACTAGCCTTGCTATTCCTTCATGTGGGTTCTCTAAAGGACCTTATAAAACCCTGCAATTGCTCAAACCCACAAAAAAATCTATAGTTTCTGGTAAATTTTGTGTTGCATTTGTGTTACCCAGTTCTCAATTAAGAGGGATTAGATGCTTGTCAAGTCTTAATGAGGGTAGTAGTAGAAGAGGTTTGCCTTGGTTAGATGAGAGTAAAGTTGAGGATTCAAAAAGGGAAGGGAAAGTTGTGAAAGTGAAAGCTGGTAGTAAGTCATCTTGGGAGGTATCAGCTGAGAAGTTCCTGCAGAGGAGCGGTGATTCCTCGGCTCAGGATGAGGGTAGGAGGAGTAGAGTTGTGGATGTGGTAGAGGATTGGCGGAAGCCTCGTGTTGAGAGAGATGATACTGTAGAGGAAGATGGTGAGACTGAGGTGGTTAAGGATCCCATATGGGATAAGATTAAGACTAGGCTTAGGCCAGTGGTTAATGCGAAAATGGGGTCTAAGAAGCCTGAGCTACAAAGATGGAATAGGCAGGAGAATTGGGGTAGGAAGACATATAGAGAGGCTAGTGAGTCGAGCTTGCCAAAGATGGTGGGAGAAGGAATTTATGGGGTTGGACCGGTTTTGGCCGCATTGTCTGCTGGGAGAAGAGAATTCTATGCACTGTATGTACAGGAAGGGTTGGAATTAAGTAAAAACAATAGGAAAAAGAAGGATAAGAAAGGGTTTGAGAAAGTTTTGAAGATAGCTGATAAGATTAGTATAAGCATAAAAGAAATTTCAAAGCATGATCTTAACATGCTGGCTGATAATCGGCCTCATCAAGGACTTGTCCTAGATGCTTCTCCATTGGAAATGGTGAGCATAAGAGAATTGGATCCTGTCTCGACGGAACATGACAAGGGTGTTCTCTGGGTAGCTTTGGATGAGGTGACTGATCCTCAGAATTTGGGTGCTATCATTAGATCATCATATTTCTTTGGAGCATCAGGGGTGATATTGTGTGCGAAGAATTCTGCTCCTTTGAGTGGTGTAGTGAGCAAAGCTAGTGCTGGTTCACTTGAGCTGATGGAGATTAGATCCTGTAAGAACATGATGCAGTTTTTGACAGCATCTGCTGAAAATGGTTGGCGGGTGCTTGGAGGTTCCGTTTCTTCAAGAGCTGTTCCATTGTGTGAGGTTGCACCTGGAGAACCCACTATTCTTGTTCTGGGAAGTGAAGGAACTGGTTTGAGGCCTCTTGTTGAGAGGTCATGCACTCAGCTAGTGAGAATCCCTGGAAATATCCCTGTGGACATATCAACTGGTAAATTTGATGATGAAGATGTTGACATGGAACATCAATGCTCGAGCGAAGAGTTCCAGTCTTTTATGGCTGTGGAGAGTCTGAATGTCAGTGTTGCAGCTGGTGTGCTATTACATCATTTAATTGGAAGCAACTATACAAATGATTACCACCCAGGGGATATGGATTCTGAAGCACTTGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_93853.p1 GENE.R_Transcript_93853~~R_Transcript_93853.p1 ORF type:complete len:544 (+),score=144.55,SpoU_methylase|PF00588.15|6.1e-25,SpoU_methylase|PF00588.15|2.2,SpoU_sub_bind|PF08032.8|7e-14 R_Transcript_93853:304-1935(+)
MYSNLSKSQALPMALRVSSQQPKFSKPFQPSKFQSFSHGTYPKPSLNPNSTSLAIPSCGFSKGPYKTLQLLKPTKKSIVSGKFCVAFVLPSSQLRGIRCLSSLNEGSSRRGLPWLDESKVEDSKREGKVVKVKAGSKSSWEVSAEKFLQRSGDSSAQDEGRRSRVVDVVEDWRKPRVERDDTVEEDGETEVVKDPIWDKIKTRLRPVVNAKMGSKKPELQRWNRQENWGRKTYREASESSLPKMVGEGIYGVGPVLAALSAGRREFYALYVQEGLELSKNNRKKKDKKGFEKVLKIADKISISIKEISKHDLNMLADNRPHQGLVLDASPLEMVSIRELDPVSTEHDKGVLWVALDEVTDPQNLGAIIRSSYFFGASGVILCAKNSAPLSGVVSKASAGSLELMEIRSCKNMMQFLTASAENGWRVLGGSVSSRAVPLCEVAPGEPTILVLGSEGTGLRPLVERSCTQLVRIPGNIPVDISTGKFDDEDVDMEHQCSSEEFQSFMAVESLNVSVAAGVLLHHLIGSNYTNDYHPGDMDSEALE*

Click here to download the sequence:
Link to NCBI Protein BLAST