Transcript Information: R_Transcript_94171.p1


Annotated TAIR IDAT1G10710.1
Annotated Gene Namepoor Homologous synapsis 1
Annotated Gene Symbol(s)PHS1
Annotation TypeHomolog
Chromosome Positionchr1:3558423-3561495 | Forward length=410
E-Value1E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1917104511925
Replicate 23.9603800186431
Replicate 35.6238098289955
Condition 2: 8 Hour
Replicate 13.958792536381
Replicate 24.6194636138976
Replicate 35.8150369352737
Condition 3: 24 Hour
Replicate 17.6984263757571
Replicate 27.0656068900951
Replicate 39.5021472443117


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_94171.p1 GENE.R_Transcript_94171~~R_Transcript_94171.p1 ORF type:complete len:334 (+),score=66.35 R_Transcript_94171:114-1115(+)
ATGGCGGATTGGTTGGCGATGATGGAGAGCGGAGCCGAGAAATCGATAATGGCTGTAAGAGAGCAATGGCGATGGCAGGTTCAATACTCTCGTTGCTTCACTTATCCTTTTAGTAGTTCTGGTGATCGGCTCTCTACTGGCACCGCCAATTCAGCTGTTCCGCCACTCTCTCCACTGAAGAAAAACATGTTCAGGCCGATTTGGATTTCGTCCTATGGATCGTCCACTCTTTCCATCCATCCTTCCGCTGATGGCTCCTCTTCGTCAGATTCTATCATCACCGTCTCTTTGCAAGGCTCAATCATCGAAGAGCACTTCATCGGCAAGCTGCACTTCACCTGGCCTCAGGTGTCATGTCTCTCAGGTTTTCCTGCTCGAGGTAGCCTTGTTGTCTTTGCAAGCTACATAGACAGTGCAGATGAGAAGCAAAAGTTTGCAATGCGGTTTTCAACAATTTCAGAAACAGAAGACTTTATAACTTCATTGGAGGACATCCTTTCCGATAAACATCCTAAAGGGCGTGCATCGGTTGTTGCCATATCTGTAATATCTTCCGAGTCTGAGCTTGTTCCTCCAGCCATATCTGCCATATCCTCTGATCAGTCCGAGTTCGTTCCTCCAGCCATATCTGCCATATCCCCTGATCAGTCTGAGTTCATTCCCCCATACAGACCTGAAATGCCAAGTGGGATGACTCTAAGTTGTACTTCTCCCTTGCCATCAAATGTGTGCTGTGAAGATCATCAGGAGTCACAGGCCCCCAATGGAGTGGCTGCTTCCGAAAACAATGCTGTAGGATTCCCTCCTAGTTTCGCATCACTTGTGTCCAATTGCTCCGCTGAGACAGAACACGGTAGTTTAGCTCTTGCTCTTACTGACGGACCTAAGGAAGTTGACTTGAAAGCTCAAATTGCGAAATATATGCAAGATGCATCCTTCCTTGATATGGTGAGTAAAGTGAATGAGGTTATCACTGAGCTTGGAGAAGACTTTGTGCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_94171.p1 GENE.R_Transcript_94171~~R_Transcript_94171.p1 ORF type:complete len:334 (+),score=66.35 R_Transcript_94171:114-1115(+)
MADWLAMMESGAEKSIMAVREQWRWQVQYSRCFTYPFSSSGDRLSTGTANSAVPPLSPLKKNMFRPIWISSYGSSTLSIHPSADGSSSSDSIITVSLQGSIIEEHFIGKLHFTWPQVSCLSGFPARGSLVVFASYIDSADEKQKFAMRFSTISETEDFITSLEDILSDKHPKGRASVVAISVISSESELVPPAISAISSDQSEFVPPAISAISPDQSEFIPPYRPEMPSGMTLSCTSPLPSNVCCEDHQESQAPNGVAASENNAVGFPPSFASLVSNCSAETEHGSLALALTDGPKEVDLKAQIAKYMQDASFLDMVSKVNEVITELGEDFVL*

Click here to download the sequence:
Link to NCBI Protein BLAST